Factsheet for HORVU2Hr1G106550.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	92.86	92.86
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	92.4	91.76
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	91.94	91.51
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	59.45	83.77
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	62.67	81.44
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	53.69	77.15
Zm00001d032932_P001	Maize	mitochondrion	63.13	64.02
Os10t0420200-01	Rice	mitochondrion	49.31	62.94
OQU91764	Sorghum	mitochondrion, plastid	64.52	55.45
GSMUA_Achr4P21190_001	Banana	cytosol	22.81	49.25
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	48.62	46.37
PGSC0003DMT400016500	Potato	nucleus	25.58	41.73
Solyc09g082560.2.1	Tomato	nucleus	44.47	41.33
HORVU5Hr1G093430.4	Barley	cytosol	43.55	40.38
HORVU3Hr1G070750.1	Barley	mitochondrion	16.59	28.8
HORVU0Hr1G005320.2	Barley	cytosol	23.73	28.3
HORVU3Hr1G070760.1	Barley	mitochondrion	23.04	26.39
HORVU1Hr1G028250.6	Barley	mitochondrion	29.49	24.29
HORVU1Hr1G075880.4	Barley	cytosol	17.97	22.61
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	29.26	22.16
HORVU7Hr1G082120.1	Barley	cytosol	21.43	21.38
HORVU5Hr1G050840.5	Barley	cytosol, plastid	24.19	18.88
HORVU1Hr1G080360.4	Barley	mitochondrion	20.28	14.94
HORVU3Hr1G067750.8	Barley	cytosol, plastid	17.05	13.31
HORVU4Hr1G081190.1	Barley	mitochondrion	10.6	11.83
HORVU2Hr1G109850.3	Barley	nucleus	16.59	10.07
HORVU2Hr1G124440.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G106550.2	EnsemblPlantsGene:HORVU2Hr1G106550	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000B47CE7E	UniProt:A0A287JC34
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:709718709..709793440

Molecular Weight (calculated)

47507.2 Da

IEP (calculated)

10.753

GRAVY (calculated)

-0.663

Length

434 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS ILAGKKGGGR RGDRRGQSQC DSTPLAELPV AASPREKRRW SFRRPAPPVK TAAAPSPLAL EPGGLSVAVA ERELEQSKHA VAVSMAAADA
101: AVIRLRPPEA EDDINLYATP VQEAAAARIQ ATFRGYLARK ALCALRGLVK LQALIRGHLV RKQARATLRR MQALLMAQTR VRAQRMRMLE DEDHAAAAPV
201: DRRSPQHPRR RRSYEMDRSG EEHAKIVEMD MGEPPRRGRS SCSVAASEPW SREGRRADYY GPGQCSPAPS AAFTEITSPR AYSGRFEDFE PATARVSAYV
301: PAGYAADEGE SASEFFPNYM ANTQSSRAKA RSQSAPKQRP DSPSPLERQP SRRRGGPAPL PRSVKMQRSS SHVGVPCSAA ATYAHYYPWP VKLDRSSASL
401: HESECGSTSS ILTASTTVGY SRSMVGFEVH RNQY

Best Arabidopsis Sequence Match ( AT4G14750.2 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.