Factsheet for HORVU1Hr1G075880.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	48.12	48.97
TraesCS1A01G341900.1	Wheat	cytosol	48.99	48.42
TraesCS1D01G344200.1	Wheat	cytosol	48.41	48.27
HORVU3Hr1G070750.1	Barley	mitochondrion	31.3	43.2
Os05t0521900-00	Rice	cytosol	45.22	42.51
Zm00001d010795_P001	Maize	cytosol, mitochondrion	38.26	40.49
Zm00001d038793_P001	Maize	cytosol	42.32	38.42
KXG22374	Sorghum	mitochondrion	43.19	37.34
HORVU3Hr1G070760.1	Barley	mitochondrion	36.81	33.51
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	18.26	18.86
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	16.81	18.83
HORVU2Hr1G106550.2	Barley	mitochondrion	22.61	17.97
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	23.48	17.8
HORVU5Hr1G093430.4	Barley	cytosol	23.48	17.31
HORVU1Hr1G028250.6	Barley	mitochondrion	26.09	17.08
HORVU0Hr1G005320.2	Barley	cytosol	17.39	16.48
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	26.09	15.71
HORVU7Hr1G082120.1	Barley	cytosol	17.1	13.56
HORVU5Hr1G050840.5	Barley	cytosol, plastid	20.87	12.95
HORVU1Hr1G080360.4	Barley	mitochondrion	21.16	12.39
HORVU3Hr1G067750.8	Barley	cytosol, plastid	19.42	12.05
HORVU4Hr1G081190.1	Barley	mitochondrion	13.04	11.57
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	8.41	9.6
HORVU2Hr1G124440.1	Barley	cytosol	1.16	6.56
HORVU2Hr1G109850.3	Barley	nucleus	11.59	5.59

Protein Annotations

EnsemblPlants:HORVU1Hr1G075880.4	EnsemblPlantsGene:HORVU1Hr1G075880	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF30	PFAM:PF00612
PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000B4760EE	UniProt:A0A287GAF9
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:512632665..512634331

Molecular Weight (calculated)

37865.1 Da

IEP (calculated)

12.944

GRAVY (calculated)

-0.816

Length

345 amino acids

Sequence
(BLAST)

001: GRAGRHAMGR AMRWLKKVLT GGKKEGSKDQ STAAPPIERR RWSFAKARSS VADASRRPSV TAVVAGELSQ SRPCGCGEAG AAVLIQKAFR GYLARKALRA
101: LKSLVKLQAL VRGYLVRKQA ATTLHRLQAL MRLQASSHAL KNLSSRRSIE QSDVFLLLLL RRSGRRRCRW RTAGGCRRGV PGTPGSTAAL GSWRWTRASC
201: VAGRPGSLAG TRPTRRRRRR RRRSPTCASR RRACSCGSWS RGSPRRPRTR PASRPSCPAA RRRKAGRRAA AGAGGSRAAR GTWRTRPPPW RGGGARARRG
301: SGTATMAPLR RACRAPGRGR RRRSRRTASA SRARRPPAAW RTTPR

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.