Factsheet for Zm00001d038793_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010795_P001	Maize	cytosol, mitochondrion	69.47	80.98
KXG22374	Sorghum	mitochondrion	75.79	72.18
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	57.63	64.6
TraesCS1A01G341900.1	Wheat	cytosol	59.21	64.47
TraesCS1D01G344200.1	Wheat	cytosol	58.16	63.87
Os05t0521900-00	Rice	cytosol	60.0	62.13
Zm00001d012767_P001	Maize	cytosol, mitochondrion	38.16	44.34
HORVU1Hr1G075880.4	Barley	cytosol	38.42	42.32
Zm00001d043510_P001	Maize	mitochondrion, nucleus	44.47	41.22
Zm00001d010366_P001	Maize	cytosol, mitochondrion	28.68	23.24
Zm00001d048437_P002	Maize	mitochondrion	24.21	23.23
Zm00001d037688_P001	Maize	mitochondrion	27.89	22.94
Zm00001d039510_P001	Maize	cytosol, mitochondrion	28.16	22.25
Zm00001d033280_P001	Maize	cytosol, mitochondrion	27.37	21.99
Zm00001d032932_P001	Maize	mitochondrion	24.74	21.96
Zm00001d008819_P001	Maize	mitochondrion	26.84	21.89
Zm00001d002630_P002	Maize	mitochondrion	26.05	21.66
Zm00001d026084_P001	Maize	mitochondrion	26.32	20.16
Zm00001d041437_P001	Maize	cytosol, mitochondrion	23.16	19.86
Zm00001d029197_P001	Maize	nucleus	21.84	17.44
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	20.26	15.31
Zm00001d048352_P001	Maize	mitochondrion	11.05	15.27
Zm00001d043655_P002	Maize	mitochondrion	20.53	13.57
Zm00001d011138_P003	Maize	cytosol, plastid	21.05	13.54
Zm00001d038838_P001	Maize	mitochondrion	20.26	13.41
Zm00001d026535_P003	Maize	nucleus	18.16	7.66
Zm00001d001953_P003	Maize	nucleus	18.16	7.52

Protein Annotations

EnsemblPlants:Zm00001d038793_P001	EnsemblPlants:Zm00001d038793_T001	EnsemblPlantsGene:Zm00001d038793	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF30	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:AQK87815.1	SEG:seg
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0004DE99B5	UniProt:A0A1D6MAL0	MapMan:35.2	:

Description

IQ-domain 25

Coordinates

chr6:+:164489575..164491362

Molecular Weight (calculated)

40971.8 Da

IEP (calculated)

11.296

GRAVY (calculated)

-0.639

Length

380 amino acids

Sequence
(BLAST)

001: MGRAMRWLKK VLTGSSKKEA SDGVRKARDA ACAGAGGGGD HGLGPPASEK RRWSFAKPRS SVSGSARRPS VAAGELSQVR PCSCGLEREV EAAAVIQKAF
101: RGYLARKALR ALKSLVKLQA LVRGYLVRKQ TAMTLRRLQA LMRLQANTAA SRRSTEQERI VARVRPLAVP AAAVHRRRLS DGGDAAGGFD RSPRIVEMDT
201: CELRCRSSRI TSRSAGGDPA GDSPLLLRCH EPAWCLQGRE LEPPPPPPPP HPKTTHNTPR LGAFAGYLGS PAKRAAACRD SGSCPRYMAG TASSVARARW
301: QSAPRQRRGE QQQQAPAGDA DGARPSPSVG RGGSRMHARP QELQAPDSFS LKSSEASRVE VEGSELSDEV TRDYYLDRLW

Best Arabidopsis Sequence Match ( AT1G51960.1 )
(BLAST)

001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L

Arabidopsis Description

IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.