Factsheet for Zm00001d012767_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33342	Sorghum	mitochondrion	77.98	64.39
Zm00001d043510_P001	Maize	mitochondrion, nucleus	75.84	60.49
HORVU3Hr1G070750.1	Barley	mitochondrion	37.61	49.2
TraesCS3A01G275900.1	Wheat	mitochondrion	55.66	48.66
HORVU3Hr1G070760.1	Barley	mitochondrion	55.05	47.49
TraesCS3B01G309600.1	Wheat	mitochondrion	54.74	47.48
TraesCS3D01G275900.1	Wheat	mitochondrion	54.43	46.84
Zm00001d010795_P001	Maize	cytosol, mitochondrion	41.9	42.02
Zm00001d038793_P001	Maize	cytosol	44.34	38.16
Os01t0743100-00	Rice	cytosol, mitochondrion	33.33	25.53
Zm00001d032932_P001	Maize	mitochondrion	27.52	21.03
Zm00001d048437_P002	Maize	mitochondrion	24.46	20.2
Zm00001d010366_P001	Maize	cytosol, mitochondrion	27.83	19.4
Zm00001d037688_P001	Maize	mitochondrion	27.22	19.26
Zm00001d039510_P001	Maize	cytosol, mitochondrion	28.13	19.13
Zm00001d033280_P001	Maize	cytosol, mitochondrion	26.61	18.39
Zm00001d008819_P001	Maize	mitochondrion	25.99	18.24
Zm00001d002630_P002	Maize	mitochondrion	25.38	18.16
Zm00001d041437_P001	Maize	cytosol, mitochondrion	23.24	17.16
Zm00001d026084_P001	Maize	mitochondrion	25.99	17.14
Zm00001d029197_P001	Maize	nucleus	22.94	15.76
Zm00001d048352_P001	Maize	mitochondrion	11.31	13.45
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	19.57	12.72
Zm00001d038838_P001	Maize	mitochondrion	21.71	12.37
Zm00001d011138_P003	Maize	cytosol, plastid	21.71	12.01
Zm00001d043655_P002	Maize	mitochondrion	20.8	11.83
Zm00001d001953_P003	Maize	nucleus	18.65	6.65
Zm00001d026535_P003	Maize	nucleus	18.04	6.55

Protein Annotations

EnsemblPlants:Zm00001d012767_P001	EnsemblPlants:Zm00001d012767_T001	EnsemblPlantsGene:Zm00001d012767	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF17	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:AQL00674.1	SEG:seg
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000221B1DF	UniProt:K7V508	MapMan:35.2	:

Description

IQ-domain 25

Coordinates

chr8:-:180436198..180437356

Molecular Weight (calculated)

37025.9 Da

IEP (calculated)

11.906

GRAVY (calculated)

-0.912

Length

327 amino acids

Sequence
(BLAST)

001: MTMRRVVRWL KWILTGRKEE HRGLEAENRR RTTGGQDAGA RQRRAAIVIQ KTFRGYLARR ALRALRSLVK IQALVRGYLV RKQAAITLHR LQTLMRLQAD
101: SIAVKNAPFR KSMEQEERIF ARDLQTKPPA HRRRLSDSTD SNYERSPRIV EMDDTGYLRS RSSRITTSSY MYNPDHLLAE RHRHAAPTPS CSPLPGGKQQ
201: PARRSYRRST RDSRGSKPAQ TGTPRIASSH DSSPAKSVDQ HGLAVASTPR RRDREGLVSP RYMAGTASSA ARTRCHSAPR QRRTAADAEH EQAPRRSCSH
301: ATRTTAGFSG IGVGDEAARD YYLDSFW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.