Factsheet for Zm00001d001953_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11606	Sorghum	nucleus	84.95	87.92
Zm00001d026535_P003	Maize	nucleus	81.68	83.13
TraesCS2A01G492300.1	Wheat	nucleus	58.34	62.14
TraesCS2D01G492600.1	Wheat	nucleus	58.12	61.9
TraesCS2B01G520500.3	Wheat	nucleus	57.03	61.03
Os04t0663100-01	Rice	plasma membrane	58.02	59.57
HORVU2Hr1G109850.3	Barley	nucleus	46.24	59.3
GSMUA_Achr3P11240_001	Banana	nucleus	30.75	36.11
GSMUA_Achr1P06080_001	Banana	nucleus	29.23	34.4
GSMUA_Achr1P19910_001	Banana	nucleus	22.03	33.78
VIT_18s0001g13870.t01	Wine grape	nucleus	29.12	33.71
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	29.88	32.39
GSMUA_Achr1P19900_001	Banana	cytosol	8.07	31.76
Solyc04g081210.2.1	Tomato	nucleus	28.9	30.74
PGSC0003DMT400009545	Potato	nucleus	28.57	30.18
KRH51729	Soybean	cytosol	25.63	27.68
CDX83739	Canola	nucleus	21.92	27.2
Bra016490.1-P	Field mustard	nucleus	21.81	27.06
CDY44186	Canola	nucleus, plastid	21.37	26.81
CDY62588	Canola	nucleus	21.59	26.72
Bra025777.1-P	Field mustard	nucleus, plastid	21.37	26.34
CDY29389	Canola	nucleus, plastid	21.37	26.2
AT1G19870.1	Thale cress	nucleus	22.14	25.57
KRH61064	Soybean	nucleus	19.41	24.48
Zm00001d038838_P001	Maize	mitochondrion	13.52	21.6
Zm00001d032932_P001	Maize	mitochondrion	9.81	21.03
Zm00001d011138_P003	Maize	cytosol, plastid	13.41	20.81
Zm00001d048437_P002	Maize	mitochondrion	8.83	20.45
Zm00001d002630_P002	Maize	mitochondrion	10.03	20.13
Zm00001d026084_P001	Maize	mitochondrion	10.25	18.95
Zm00001d012767_P001	Maize	cytosol, mitochondrion	6.65	18.65
Zm00001d038793_P001	Maize	cytosol	7.52	18.16
Zm00001d010366_P001	Maize	cytosol, mitochondrion	9.27	18.12
Zm00001d010795_P001	Maize	cytosol, mitochondrion	6.43	18.1
Zm00001d033280_P001	Maize	cytosol, mitochondrion	9.27	17.97
Zm00001d037688_P001	Maize	mitochondrion	8.94	17.75
Zm00001d039510_P001	Maize	cytosol, mitochondrion	9.27	17.67
Zm00001d041437_P001	Maize	cytosol, mitochondrion	8.29	17.16
Zm00001d043655_P002	Maize	mitochondrion	10.58	16.87
Zm00001d043510_P001	Maize	mitochondrion, nucleus	7.52	16.83
Zm00001d008819_P001	Maize	mitochondrion	8.51	16.74
Zm00001d029197_P001	Maize	nucleus	8.29	15.97
Zm00001d048352_P001	Maize	mitochondrion	4.69	15.64
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	6.32	11.53
CDX75112	Canola	cytosol	1.09	7.19

Protein Annotations

EnsemblPlants:Zm00001d001953_P003	EnsemblPlants:Zm00001d001953_T003	EnsemblPlantsGene:Zm00001d001953	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612
PFscan:PS50096	ProteinID:ONM12556.1	SEG:seg	UniParc:UPI000842920E	UniProt:A0A1D6DUS5	MapMan:35.1

Description

Protein IQ-DOMAIN 32

Coordinates

chr2:-:3438998..3444233

Molecular Weight (calculated)

99767.6 Da

IEP (calculated)

4.690

GRAVY (calculated)

-0.894

Length

917 amino acids

Sequence
(BLAST)

001: MARSKNGCLK ILVCAGSGSD PSAGSDADDH PDEENNAISD KSRWSFRRRS TRHRVLKNSD ISEPETLSSS KAKADITPSN NVYTSTYSYA SEKPLQQDKP
101: DEKTLHQEKP EEKPLYQGNS DEKLMEKPSE KPTDKLMEEP ADQIIEKSIE LPTQRITETP TDEPAEKINV APTEEPAGKI TETASENTAE GSIKNATEET
201: PERAVEELIE EADESISVSS TVLKEEENTS LVEGSSGDPE EDHLESAATN LQPRSDTCIA REELLNQKDL VKLQAVIRGH LVRKQASESL QCLLAIIKIQ
301: GLIRAHQAQH SPGKIQETIV HSSGEKLLRN GFALKLMDNT PTSKSIRIKC DPSESDVTWG WMERWTALIP PITVVHLPEH KENSELMGET VTEQVTEHAQ
401: CDEDIVPLDS DLSFPKLVAD DVKETVETSD FSALEAPASV PDESPKMEMK HDPESELIET TNADADHVTD QKAENDVDEP FMSLDQQYAQ ADDASRNPCP
501: LPGKFEPSNE DSGDAYNSEQ TLEMEGKRFV ARKPCNPAFA AAQLKFEELS TNSTVSRSSS PPHLDGVSKP RMHTPSSQED YTPKQDGTGI QESSAGHDTK
601: MRIAASECGT EISISSTLDS PDRSEGDGGE IVLEIGALEN RNYVTGKADK DSSIVHPGVK DAPEAEAQPQ KEVEENGHVP ALETEAQPQK EPHTEPEVAD
701: LHGQLEKSVT SYATPEGTPM SRTTTIPESH GTPSSEVSVN TKRSRSNKPK SHASKRSLAS PGSDSVGRSS TDKFSKESRH AKRESSSSKA AKSDQGDQEP
801: RVSNSNSNPL PSYMQFTESA RAKASSPKMS PDVQDSNAAR KRHSLPMTNG KHDSSPRMQR SSSSQAPQGV KSSGPSPHSA SGGKCLISLV TPLLCVHLVK
901: DIEPSYAQAQ TRGGISD

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.