Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62588 | Canola | nucleus | 91.61 | 91.36 |
| CDY29389 | Canola | nucleus, plastid | 79.7 | 78.74 |
| CDY44186 | Canola | nucleus, plastid | 76.05 | 76.88 |
| AT1G19870.1 | Thale cress | nucleus | 76.45 | 71.16 |
| VIT_18s0001g13870.t01 | Wine grape | nucleus | 39.11 | 36.49 |
| KRH51729 | Soybean | cytosol | 37.62 | 32.74 |
| CDX90650 | Canola | mitochondrion | 4.47 | 32.04 |
| Solyc04g081210.2.1 | Tomato | nucleus | 36.67 | 31.44 |
| PGSC0003DMT400009545 | Potato | nucleus | 36.81 | 31.34 |
| CDY29016 | Canola | mitochondrion | 4.33 | 31.07 |
| KRH61064 | Soybean | nucleus | 26.25 | 26.68 |
| CDX73724 | Canola | mitochondrion | 4.47 | 25.38 |
| CDY29768 | Canola | cytosol | 5.68 | 25.15 |
| TraesCS2B01G520500.3 | Wheat | nucleus | 28.42 | 24.5 |
| TraesCS2A01G492300.1 | Wheat | nucleus | 28.42 | 24.39 |
| TraesCS2D01G492600.1 | Wheat | nucleus | 28.28 | 24.27 |
| EES11606 | Sorghum | nucleus | 28.55 | 23.81 |
| CDY53440 | Canola | mitochondrion | 9.07 | 23.1 |
| Os04t0663100-01 | Rice | plasma membrane | 27.88 | 23.07 |
| CDY46537 | Canola | cytosol, mitochondrion | 8.93 | 22.76 |
| Zm00001d026535_P003 | Maize | nucleus | 27.2 | 22.31 |
| Zm00001d001953_P003 | Maize | nucleus | 27.2 | 21.92 |
| CDX78003 | Canola | mitochondrion | 4.47 | 21.71 |
| CDY45643 | Canola | cytosol | 9.47 | 21.47 |
| CDY50677 | Canola | nucleus | 10.28 | 20.65 |
| CDY36861 | Canola | nucleus | 10.28 | 20.32 |
| CDX98994 | Canola | mitochondrion | 9.61 | 20.06 |
| CDX70019 | Canola | cytosol, mitochondrion | 9.47 | 19.77 |
| CDX85648 | Canola | nucleus | 10.42 | 19.49 |
| CDY04138 | Canola | cytosol, plastid | 14.75 | 19.43 |
| CDY04137 | Canola | cytosol, plastid | 14.75 | 19.36 |
| CDY41676 | Canola | cytosol, plastid | 15.02 | 19.3 |
| CDY00253 | Canola | plastid | 10.28 | 19.29 |
| CDY68636 | Canola | cytosol | 10.15 | 19.28 |
| CDX78285 | Canola | plastid | 8.93 | 19.19 |
| CDY67405 | Canola | cytosol | 15.02 | 19.17 |
| CDY17427 | Canola | cytosol, plastid | 14.61 | 19.05 |
| CDX86928 | Canola | mitochondrion, plastid | 10.15 | 19.04 |
| CDX82400 | Canola | cytosol | 9.47 | 18.77 |
| CDY67178 | Canola | cytosol, mitochondrion | 9.74 | 18.56 |
| CDY00251 | Canola | plastid | 10.28 | 18.49 |
| CDY45197 | Canola | nucleus, plastid | 14.48 | 18.35 |
| CDY03037 | Canola | cytosol | 14.34 | 18.34 |
| CDY30233 | Canola | mitochondrion | 9.61 | 18.3 |
| CDX91120 | Canola | nucleus | 9.2 | 18.13 |
| CDX75883 | Canola | cytosol | 9.2 | 18.13 |
| CDY47784 | Canola | mitochondrion | 9.47 | 18.04 |
| CDY43103 | Canola | cytosol | 8.93 | 17.93 |
| CDX98787 | Canola | mitochondrion | 7.17 | 17.91 |
| CDX70505 | Canola | nucleus | 10.55 | 17.49 |
| CDX78523 | Canola | nucleus | 10.55 | 17.49 |
| CDY64325 | Canola | cytosol | 8.8 | 17.43 |
| CDX83805 | Canola | cytosol, mitochondrion | 13.13 | 17.38 |
| CDX92076 | Canola | cytosol | 9.07 | 17.31 |
| CDX81042 | Canola | plastid | 8.93 | 17.05 |
| CDY26720 | Canola | cytosol, mitochondrion | 12.72 | 16.67 |
| CDY19251 | Canola | cytosol, mitochondrion | 12.58 | 16.61 |
| CDX94150 | Canola | nucleus | 10.28 | 16.38 |
| CDX98786 | Canola | nucleus | 10.42 | 16.21 |
| CDY49085 | Canola | cytosol | 13.26 | 15.99 |
| CDY53133 | Canola | nucleus | 10.42 | 15.84 |
| CDY72577 | Canola | cytosol, mitochondrion | 6.09 | 15.52 |
| CDY39317 | Canola | cytosol | 12.72 | 15.49 |
| CDY41368 | Canola | mitochondrion, plastid | 8.8 | 15.48 |
| CDY41252 | Canola | cytosol, mitochondrion | 10.15 | 15.37 |
| CDX76341 | Canola | mitochondrion, plastid | 8.66 | 15.24 |
| CDX70272 | Canola | cytosol, mitochondrion | 5.95 | 15.02 |
| CDX96693 | Canola | nucleus | 13.53 | 14.86 |
| CDY41417 | Canola | mitochondrion | 5.82 | 14.38 |
| CDY41423 | Canola | cytosol, mitochondrion | 5.68 | 14.33 |
| CDY14162 | Canola | endoplasmic reticulum | 6.36 | 14.03 |
| CDY04907 | Canola | endoplasmic reticulum | 6.36 | 14.03 |
| CDX75112 | Canola | cytosol | 1.49 | 7.91 |
Protein Annotations
| EnsemblPlants:CDX83739 | EnsemblPlantsGene:GSBRNA2T00139465001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF16 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX83739 | ProteinID:CDX83739.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI0004EDB38D | MapMan:35.1 | : | : | : |
Description
BnaC08g19060D
Coordinates
chrLK031834:+:84275..87568
Molecular Weight (calculated)
80256.2 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.837
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPASSCL RIIACAGGDD AAEPAANSLE SKSSGDKRGW SFRKKSGKQR GVTITSVAVS ETSPASRTRE TLESALLKSP SPDNNNVVDE KQTFSVVDDE
101: KKKKSQLPVA YVAEPVDLNK ATEVAVLVES KGTETEEDDL IENELQSKLE GADATVIEKD STPEVEKDDV IIITKEVDDS VVIIIQAAIR GFLARRELLR
201: RKKVVKLQAA VRGHLVRNQA MGSLRCIQAI VKMQTLVRAR HSAKDGSRVS AISDKAESNA AAQKLLENKF AKHLMESTPK TKPISIKCDP TKPSSAWSWL
301: ERWMSVSKPE KTPKPDLATE ETNNAKVSSQ VDLVSSDSTL ETEAETGFSS KVVDHHVELS ETEKTSQCDS PQASVEVDHD LMIQSHPPAA KDTEAGYVDE
401: QPKHSLKRKA SNPSFAAAKS KFEELTSSSA GSNKAMTLSS KEGKTDIDSL EADTTTTKKD QSVEEVTPAE NNGSECGTEL SVTSSLDSLD KKSDFEGAES
501: KVEAKLLENG TPKTDQAELI EIDVNSKTPL TTVENSKEKA ENVKDEAEVS VTQHESVITT PDSKKRRAED ESGPQANSLP EEAVTPMTIT ESQATPASQA
601: SSSVNARKEK SGKSGSSRKR KVSKKIASSP KQETDTTTEQ EGKEQRSGRR NSFGYDQEAR DSCSGGKNSI PRFMQPTQSA KAKVQEHNSP RSSPDVQERE
701: VSVKKRHSLP VVANGKQVSP RIQRSASQAQ PGKDRKWQR
101: KKKKSQLPVA YVAEPVDLNK ATEVAVLVES KGTETEEDDL IENELQSKLE GADATVIEKD STPEVEKDDV IIITKEVDDS VVIIIQAAIR GFLARRELLR
201: RKKVVKLQAA VRGHLVRNQA MGSLRCIQAI VKMQTLVRAR HSAKDGSRVS AISDKAESNA AAQKLLENKF AKHLMESTPK TKPISIKCDP TKPSSAWSWL
301: ERWMSVSKPE KTPKPDLATE ETNNAKVSSQ VDLVSSDSTL ETEAETGFSS KVVDHHVELS ETEKTSQCDS PQASVEVDHD LMIQSHPPAA KDTEAGYVDE
401: QPKHSLKRKA SNPSFAAAKS KFEELTSSSA GSNKAMTLSS KEGKTDIDSL EADTTTTKKD QSVEEVTPAE NNGSECGTEL SVTSSLDSLD KKSDFEGAES
501: KVEAKLLENG TPKTDQAELI EIDVNSKTPL TTVENSKEKA ENVKDEAEVS VTQHESVITT PDSKKRRAED ESGPQANSLP EEAVTPMTIT ESQATPASQA
601: SSSVNARKEK SGKSGSSRKR KVSKKIASSP KQETDTTTEQ EGKEQRSGRR NSFGYDQEAR DSCSGGKNSI PRFMQPTQSA KAKVQEHNSP RSSPDVQERE
701: VSVKKRHSLP VVANGKQVSP RIQRSASQAQ PGKDRKWQR
001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR
Arabidopsis Description
IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.