Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82400 | Canola | cytosol | 93.07 | 93.57 |
| CDY68636 | Canola | cytosol | 86.4 | 83.29 |
| CDY43103 | Canola | cytosol | 81.07 | 82.61 |
| AT3G16490.1 | Thale cress | cytosol | 85.6 | 82.52 |
| CDX92076 | Canola | cytosol | 85.07 | 82.43 |
| CDY67178 | Canola | cytosol, mitochondrion | 84.8 | 81.96 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 58.13 | 54.23 |
| Solyc06g066430.2.1 | Tomato | nucleus | 55.73 | 53.32 |
| KRH47199 | Soybean | cytosol | 56.0 | 53.03 |
| CDY46537 | Canola | cytosol, mitochondrion | 40.27 | 52.07 |
| CDY53440 | Canola | mitochondrion | 40.0 | 51.72 |
| KRH44268 | Soybean | cytosol | 55.2 | 51.49 |
| CDY45643 | Canola | cytosol | 40.8 | 46.93 |
| PGSC0003DMT400042595 | Potato | nucleus | 18.93 | 46.71 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 40.8 | 40.8 |
| CDY30233 | Canola | mitochondrion | 41.33 | 39.95 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 47.73 | 39.43 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 47.73 | 39.43 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 47.47 | 39.21 |
| CDY47784 | Canola | mitochondrion | 40.53 | 39.18 |
| GSMUA_Achr10P... | Banana | cytosol | 45.87 | 39.0 |
| Os05t0187500-01 | Rice | cytosol | 48.8 | 38.94 |
| CDX90650 | Canola | mitochondrion | 10.67 | 38.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.67 | 38.26 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 46.93 | 38.18 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 41.33 | 38.18 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 46.93 | 38.01 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 47.2 | 37.9 |
| CDY29016 | Canola | mitochondrion | 10.4 | 37.86 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 46.93 | 37.85 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 40.53 | 37.62 |
| Zm00001d037688_P001 | Maize | mitochondrion | 46.13 | 37.45 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 36.8 | 37.4 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 37.33 | 37.14 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 45.87 | 36.67 |
| EES02320 | Sorghum | mitochondrion | 46.67 | 36.46 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 47.2 | 35.9 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 37.6 | 35.25 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 45.07 | 35.14 |
| Zm00001d008819_P001 | Maize | mitochondrion | 42.93 | 34.55 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 48.0 | 34.16 |
| CDX78285 | Canola | plastid | 28.8 | 31.4 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 46.67 | 30.54 |
| CDX98994 | Canola | mitochondrion | 28.8 | 30.51 |
| CDX70019 | Canola | cytosol, mitochondrion | 28.27 | 29.94 |
| CDY29768 | Canola | cytosol | 13.33 | 29.94 |
| CDY00253 | Canola | plastid | 30.93 | 29.44 |
| CDX73724 | Canola | mitochondrion | 10.13 | 29.23 |
| CDX86928 | Canola | mitochondrion, plastid | 30.67 | 29.19 |
| CDY00251 | Canola | plastid | 30.93 | 28.22 |
| CDX81042 | Canola | plastid | 28.53 | 27.65 |
| CDY50677 | Canola | nucleus | 25.87 | 26.36 |
| CDY41252 | Canola | cytosol, mitochondrion | 33.87 | 26.02 |
| CDY36861 | Canola | nucleus | 25.87 | 25.94 |
| CDY53133 | Canola | nucleus | 33.33 | 25.72 |
| CDX78003 | Canola | mitochondrion | 10.4 | 25.66 |
| CDY41368 | Canola | mitochondrion, plastid | 28.27 | 25.24 |
| CDX98786 | Canola | nucleus | 31.73 | 25.05 |
| CDX70272 | Canola | cytosol, mitochondrion | 19.47 | 24.91 |
| CDY41423 | Canola | cytosol, mitochondrion | 19.2 | 24.57 |
| CDX94150 | Canola | nucleus | 30.4 | 24.57 |
| CDX76341 | Canola | mitochondrion, plastid | 27.2 | 24.29 |
| CDY64325 | Canola | cytosol | 24.0 | 24.13 |
| CDX98787 | Canola | mitochondrion | 18.67 | 23.65 |
| CDY72577 | Canola | cytosol, mitochondrion | 17.87 | 23.1 |
| CDY04907 | Canola | endoplasmic reticulum | 20.53 | 22.99 |
| CDY14162 | Canola | endoplasmic reticulum | 20.53 | 22.99 |
| CDX91120 | Canola | nucleus | 20.0 | 20.0 |
| CDX85648 | Canola | nucleus | 20.8 | 19.75 |
| CDY41417 | Canola | mitochondrion | 14.93 | 18.73 |
| CDX70505 | Canola | nucleus | 21.07 | 17.71 |
| CDX78523 | Canola | nucleus | 21.07 | 17.71 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.27 | 13.62 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.73 | 13.21 |
| CDY26720 | Canola | cytosol, mitochondrion | 19.2 | 12.77 |
| CDX96693 | Canola | nucleus | 20.27 | 11.29 |
| CDY17427 | Canola | cytosol, plastid | 17.07 | 11.29 |
| CDY03037 | Canola | cytosol | 17.33 | 11.25 |
| CDY67405 | Canola | cytosol | 17.33 | 11.23 |
| CDY04137 | Canola | cytosol, plastid | 16.8 | 11.19 |
| CDY41676 | Canola | cytosol, plastid | 17.07 | 11.13 |
| CDY04138 | Canola | cytosol, plastid | 16.53 | 11.05 |
| CDY45197 | Canola | nucleus, plastid | 17.07 | 10.98 |
| CDX75112 | Canola | cytosol | 3.73 | 10.07 |
| CDY49085 | Canola | cytosol | 16.27 | 9.95 |
| CDY44186 | Canola | nucleus, plastid | 18.13 | 9.3 |
| CDX83739 | Canola | nucleus | 18.13 | 9.2 |
| CDY39317 | Canola | cytosol | 14.67 | 9.06 |
| CDY62588 | Canola | nucleus | 17.6 | 8.91 |
| CDY29389 | Canola | nucleus, plastid | 17.6 | 8.82 |
Protein Annotations
| EnsemblPlants:CDX75883 | EnsemblPlantsGene:GSBRNA2T00123879001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX75883 | ProteinID:CDX75883.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EEF760 | MapMan:35.2 | : | : | : | : |
Description
BnaC03g39660D
Coordinates
chrLK031805:-:1511084..1512472
Molecular Weight (calculated)
42057.9 Da
IEP (calculated)
10.680
GRAVY (calculated)
-0.688
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRASRWFKG IFGMKKSKEK ESPVSGDGRG ETGGSLVYGK TLQADSVWLR TYLAETDIEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGTTMERWAA VKIQTIFKGY LARKALRALK GIVKLQALVR GYLVRKRPAE TLHSMQALIR AQTSVRSQRI NRNNMLHIHP RHSLERSDDS RSEVHSKRIS
201: VSVEKHNNNN TYNETSPKIV EIDTYKTKSR SRRLNVDVSE HGDDIEWSFP GDKCKFPTAQ NTPRFYSSAV NNHHYYYTPP SPAKSVCRDA CFRPSHPGLM
301: SPSYMANTLS FKAKVRSHSA PRQRPDKKKL SLEEIMAARS SVSGVRMVQP QQEKRSSCSY DRQFPQERVD FRYYN
101: SGTTMERWAA VKIQTIFKGY LARKALRALK GIVKLQALVR GYLVRKRPAE TLHSMQALIR AQTSVRSQRI NRNNMLHIHP RHSLERSDDS RSEVHSKRIS
201: VSVEKHNNNN TYNETSPKIV EIDTYKTKSR SRRLNVDVSE HGDDIEWSFP GDKCKFPTAQ NTPRFYSSAV NNHHYYYTPP SPAKSVCRDA CFRPSHPGLM
301: SPSYMANTLS FKAKVRSHSA PRQRPDKKKL SLEEIMAARS SVSGVRMVQP QQEKRSSCSY DRQFPQERVD FRYYN
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.