Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G123800.1 | Wheat | cytosol | 78.72 | 81.5 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 78.51 | 81.28 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 78.09 | 80.84 |
| Zm00001d037688_P001 | Maize | mitochondrion | 74.68 | 75.97 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 74.47 | 75.27 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 74.04 | 74.2 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 76.81 | 73.23 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 78.3 | 69.83 |
| KRH48993 | Soybean | plastid | 11.91 | 59.57 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 46.6 | 58.4 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 49.15 | 57.18 |
| GSMUA_Achr10P... | Banana | cytosol | 53.62 | 57.14 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 47.23 | 55.22 |
| VIT_11s0016g03030.t01 | Wine grape | cytosol | 50.85 | 54.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.98 | 53.3 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 45.96 | 53.2 |
| Solyc06g066430.2.1 | Tomato | nucleus | 44.04 | 52.81 |
| KRH47199 | Soybean | cytosol | 44.04 | 52.27 |
| KRH44268 | Soybean | cytosol | 44.26 | 51.74 |
| KRH74242 | Soybean | cytosol, mitochondrion | 46.17 | 51.67 |
| KRH60203 | Soybean | cytosol, mitochondrion | 38.3 | 50.0 |
| KRH41488 | Soybean | cytosol, mitochondrion | 46.17 | 49.77 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 39.57 | 49.34 |
| Solyc12g008520.1.1 | Tomato | cytosol | 42.77 | 49.14 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 38.51 | 49.05 |
| CDX75883 | Canola | cytosol | 38.94 | 48.8 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 41.49 | 48.75 |
| CDY43103 | Canola | cytosol | 38.09 | 48.64 |
| Bra021181.1-P | Field mustard | cytosol | 40.21 | 48.59 |
| CDY68636 | Canola | cytosol | 40.21 | 48.59 |
| Bra001633.1-P | Field mustard | cytosol | 38.3 | 48.26 |
| AT3G16490.1 | Thale cress | cytosol | 39.79 | 48.07 |
| CDX82400 | Canola | cytosol | 38.09 | 47.99 |
| Bra022163.1-P | Field mustard | cytosol | 39.36 | 47.8 |
| CDX92076 | Canola | cytosol | 39.36 | 47.8 |
| PGSC0003DMT400042595 | Potato | nucleus | 15.32 | 47.37 |
| CDY67178 | Canola | cytosol, mitochondrion | 38.72 | 46.91 |
| PGSC0003DMT400000953 | Potato | cytosol | 34.89 | 45.05 |
| AT4G29150.1 | Thale cress | mitochondrion | 37.87 | 44.61 |
| CDY30233 | Canola | mitochondrion | 36.6 | 44.33 |
| Bra024161.1-P | Field mustard | mitochondrion | 36.6 | 44.33 |
| CDY47784 | Canola | mitochondrion | 36.17 | 43.81 |
| CDY53440 | Canola | mitochondrion | 26.6 | 43.1 |
| Bra014304.1-P | Field mustard | cytosol, mitochondrion | 26.6 | 43.1 |
| CDY46537 | Canola | cytosol, mitochondrion | 26.6 | 43.1 |
| KRH48992 | Soybean | endoplasmic reticulum | 30.85 | 42.9 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 31.91 | 42.73 |
| CDY45643 | Canola | cytosol | 28.51 | 41.1 |
| Bra030407.1-P | Field mustard | cytosol | 28.72 | 40.06 |
| KRH23382 | Soybean | cytosol | 29.57 | 36.58 |
| KRH09951 | Soybean | cytosol | 29.15 | 36.24 |
| Os03t0161400-01 | Rice | cytosol, mitochondrion | 30.0 | 34.39 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 31.91 | 32.33 |
| Os05t0521900-00 | Rice | cytosol | 24.04 | 30.79 |
| Os03t0636700-00 | Rice | mitochondrion | 28.3 | 29.75 |
| Os10t0420200-01 | Rice | mitochondrion | 21.28 | 29.41 |
| Os03t0355700-00 | Rice | cytosol | 26.6 | 27.72 |
| Os12t0604500-00 | Rice | cytosol | 24.68 | 26.01 |
| Os02t0299200-01 | Rice | cytosol, mitochondrion, nucleus | 23.62 | 22.89 |
| Os05t0100008-00 | Rice | cytosol | 6.17 | 18.12 |
| Os01t0743100-00 | Rice | cytosol, mitochondrion | 16.38 | 18.03 |
| Os03t0134800-00 | Rice | mitochondrion | 10.43 | 16.17 |
| Os05t0535900-01 | Rice | cytosol | 19.15 | 15.68 |
| Os01t0716200-01 | Rice | nucleus | 18.09 | 14.81 |
| Os04t0663100-01 | Rice | plasma membrane | 20.21 | 10.64 |
Protein Annotations
| EMBL:KT895078 | EnsemblPlants:Os05t0187500-01 | EnsemblPlantsGene:Os05g0187500 | EntrezGene:4338011 | Gene3D:1.20.5.190 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 |
| PANTHER:PTHR32295:SF27 | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | RefSeq:XP_015638959.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI0007754BC9 | UniProt:A0A1D8GZC0 | MapMan:35.2 | : | : |
Description
GRAIN WIDTH 5IQ calmodulin-binding motif family protein, Positive regulator of brassinosteroid signalling, Regulation of grain width and weight (Os05t0187500-01)
Coordinates
chr5:+:5365122..5366701
Molecular Weight (calculated)
49192.9 Da
IEP (calculated)
11.125
GRAVY (calculated)
-0.375
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAARWFRN MWGGGRKEQK GEAPASGGKR WSFGKSSRDS AEAAAAAAAA AAEASGGNAA IARAAEAAWL RSVYADTERE QSKHAIAVAA ATAAAADAAV
101: AAAQAAVAVV RLTSKGRSAP VLAATVAGDT RSLAAAAVRI QTAFRGFLAK KALRALKALV KLQALVRGYL VRRQAAATLQ SMQALVRAQA TVRAHRSGAG
201: AAANLPHLHH APFWPRRSLQ ERCAGDDTRS EHGVAAYSRR LSASIESSSY GYDRSPKIVE VDTGRPKSRS SSSRRASSPL LLDAAGCASG GEDWCANSMS
301: SPLPCYLPGG APPPRIAVPT SRHFPDYDWC ALEKARPATA QSTPRYAHAP PTPTKSVCGG GGGGGIHSSP LNCPNYMSNT QSFEAKVRSQ SAPKQRPETG
401: GAGAGGGRKR VPLSEVVVVE SRASLSGVGM QRSCNRVQEA FNFKTAVVGR LDRSSESGEN DRHAFLQRRW
101: AAAQAAVAVV RLTSKGRSAP VLAATVAGDT RSLAAAAVRI QTAFRGFLAK KALRALKALV KLQALVRGYL VRRQAAATLQ SMQALVRAQA TVRAHRSGAG
201: AAANLPHLHH APFWPRRSLQ ERCAGDDTRS EHGVAAYSRR LSASIESSSY GYDRSPKIVE VDTGRPKSRS SSSRRASSPL LLDAAGCASG GEDWCANSMS
301: SPLPCYLPGG APPPRIAVPT SRHFPDYDWC ALEKARPATA QSTPRYAHAP PTPTKSVCGG GGGGGIHSSP LNCPNYMSNT QSFEAKVRSQ SAPKQRPETG
401: GAGAGGGRKR VPLSEVVVVE SRASLSGVGM QRSCNRVQEA FNFKTAVVGR LDRSSESGEN DRHAFLQRRW
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.