CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23382	Soybean	cytosol	91.27	90.79
KRH48993	Soybean	plastid	12.43	50.0
KRH47199	Soybean	cytosol	49.21	46.97
KRH44268	Soybean	cytosol	49.21	46.27
PGSC0003DMT400042595	Potato	nucleus	18.25	45.39
KRH74242	Soybean	cytosol, mitochondrion	41.53	37.38
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	35.71	36.0
KRH60203	Soybean	cytosol, mitochondrion	34.13	35.83
KRH41488	Soybean	cytosol, mitochondrion	40.21	34.86
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	34.13	34.22
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	35.98	33.66
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	35.71	33.25
GSMUA_AchrUn_...	Banana	cytosol	33.07	32.98
GSMUA_Achr10P...	Banana	cytosol	38.36	32.88
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	34.39	32.5
KRH48992	Soybean	endoplasmic reticulum	28.31	31.66
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	30.42	31.17
TraesCS1A01G122900.1	Wheat	cytosol, plastid	36.24	30.18
TraesCS1B01G142100.1	Wheat	cytosol	36.24	30.18
TraesCS1D01G123800.1	Wheat	cytosol	36.24	30.18
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	36.51	29.93
TraesCS3B01G127100.1	Wheat	cytosol	36.51	29.81
Zm00001d010366_P001	Maize	cytosol, mitochondrion	36.77	29.64
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	36.51	29.55
Os01t0190500-01	Rice	cytosol, mitochondrion	36.24	29.46
Os05t0187500-01	Rice	cytosol	36.24	29.15
Zm00001d037688_P001	Maize	mitochondrion	34.92	28.57
KRH77498	Soybean	cytosol, mitochondrion	29.63	28.28
KXG21487	Sorghum	cytosol, mitochondrion	36.24	27.79
KRH03972	Soybean	cytosol	32.01	27.07
KRH57246	Soybean	cytosol	31.75	26.97
EES02320	Sorghum	mitochondrion	34.13	26.88
Zm00001d039510_P001	Maize	cytosol, mitochondrion	33.6	26.4
HORVU1Hr1G028250.6	Barley	mitochondrion	36.51	26.19
Zm00001d008819_P001	Maize	mitochondrion	31.75	25.75
KRH07958	Soybean	mitochondrion	9.52	25.53
KRH31669	Soybean	cytosol, mitochondrion	28.31	25.3
KRH69109	Soybean	nucleus	27.78	25.18
KRH35475	Soybean	cytosol	30.69	24.73
KRG91354	Soybean	cytosol, plastid	30.16	24.36
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	36.24	23.91
KRH09113	Soybean	cytosol	29.37	23.27
KRG91452	Soybean	cytosol	28.04	23.25
KRH35361	Soybean	cytosol, mitochondrion	28.04	22.84
KRH38565	Soybean	cytosol	29.1	22.82
KRH68719	Soybean	cytosol	21.96	22.19
KRG96957	Soybean	cytosol	21.43	21.89
KRH23930	Soybean	nucleus	23.55	19.35
KRH39865	Soybean	nucleus	23.55	18.98
KRH29958	Soybean	cytosol, mitochondrion	21.16	17.51
KRH63082	Soybean	cytosol	20.63	17.33
KRH33197	Soybean	cytosol, mitochondrion	17.72	17.18
KRH63392	Soybean	cytosol	22.22	14.41
KRH54515	Soybean	cytosol	21.43	13.87
KRG99144	Soybean	cytosol, plastid	19.84	13.71
KRH45861	Soybean	plastid	19.58	13.53
KRH03447	Soybean	nucleus	20.9	13.44
KRH56937	Soybean	cytosol	20.63	13.31
KRH74806	Soybean	cytosol, plastid	16.14	10.83
KRH69321	Soybean	cytosol, mitochondrion	16.14	10.83
KRH51729	Soybean	cytosol	19.31	8.6
KRH61064	Soybean	nucleus	11.38	5.91

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EMBL:ACUP02009115	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_15G020600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1MCV7	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KRH09951
ProteinID:KRH09951	ProteinID:KRH09951.1	ProteinID:KRH09952.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000233B2EF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:1595899..1598954

Molecular Weight (calculated)

43301.0 Da

IEP (calculated)

10.800

GRAVY (calculated)

-0.754

Length

378 amino acids

Sequence
(BLAST)

001: MGKATRWLKG LLGKKKEKDY RGYSGSLDLD KREKKQSEKD EVSHITPTNV TTFDRTRFRS YAAPKEKNKH SIDVAVVRSK SCDRGNLLIG SREGWAAVLI
101: QSFFRGYLAR KALRALKGLV KIQALVRGYL VRKRVAATLH SVQAMLRAQA VARSVRARRS MDKENRFHPQ TPSRKYMQRF DEARNYQLHN RRVPIYCKAP
201: FNGFDESQKV VEVDTHMPHS SSRSINTAMS ECGEDLHYQA MSSSLGCPIQ GRISLHERQH PQEFEWLFNV DEGNNKFSTA HNTPRLPKCM PPGTPVKSIC
301: GKTFFRPCSN FPNYMANTHS SKAKLRSHSA PKQRPELKKR LSINEMIAAR NSFSGVRMQW SSSNPKTQED CCFFERVI

Best Arabidopsis Sequence Match ( AT1G51960.1 )
(BLAST)

001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L

Arabidopsis Description

IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.