CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57246	Soybean	cytosol	91.05	91.46
KRH77498	Soybean	cytosol, mitochondrion	54.14	61.11
VIT_02s0025g04120.t01	Wine grape	mitochondrion	59.06	53.44
GSMUA_Achr8P11920_001	Banana	cytosol	40.94	50.97
Solyc08g080470.2.1	Tomato	plastid	53.24	47.7
PGSC0003DMT400007855	Potato	cytosol, plastid	53.24	47.6
Solyc08g007920.1.1	Tomato	cytosol	23.94	45.73
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	45.64	44.44
EES12687	Sorghum	cytosol, mitochondrion	46.31	44.33
Solyc08g007930.1.1	Tomato	cytosol	22.15	43.61
Zm00001d002630_P002	Maize	mitochondrion	44.52	43.54
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	44.74	43.48
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	44.74	43.29
Os04t0569900-01	Rice	cytosol, mitochondrion	44.52	42.89
CDX98787	Canola	mitochondrion	28.19	42.57
CDY41368	Canola	mitochondrion, plastid	39.82	42.38
PGSC0003DMT400014796	Potato	cytosol	34.0	42.22
CDX76341	Canola	mitochondrion, plastid	39.37	41.9
Bra020822.1-P	Field mustard	mitochondrion, plastid	39.37	41.9
CDY53133	Canola	nucleus	45.19	41.56
HORVU0Hr1G005320.2	Barley	cytosol	33.78	41.48
CDY41252	Canola	cytosol, mitochondrion	45.19	41.39
Bra013672.1-P	Field mustard	mitochondrion, nucleus	45.41	40.93
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	40.04	40.87
CDX98786	Canola	nucleus	43.4	40.84
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	39.15	40.79
Zm00001d026084_P001	Maize	mitochondrion	45.19	40.73
AT4G23060.1	Thale cress	mitochondrion, nucleus	43.85	40.5
Bra019337.1-P	Field mustard	nucleus	42.51	40.34
CDX94150	Canola	nucleus	41.83	40.3
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	38.03	40.19
KRH48993	Soybean	plastid	7.83	37.23
KRH09113	Soybean	cytosol	39.15	36.69
KRG91452	Soybean	cytosol	37.36	36.62
KRH47199	Soybean	cytosol	32.21	36.36
KRH35361	Soybean	cytosol, mitochondrion	37.14	35.78
KRH38565	Soybean	cytosol	38.26	35.48
KRH44268	Soybean	cytosol	31.54	35.07
KRH23382	Soybean	cytosol	27.29	32.11
KRH09951	Soybean	cytosol	27.07	32.01
KRH60203	Soybean	cytosol, mitochondrion	25.73	31.94
KRH74242	Soybean	cytosol, mitochondrion	29.53	31.43
KRH41488	Soybean	cytosol, mitochondrion	29.98	30.73
KRH35475	Soybean	cytosol	31.32	29.85
KRG91354	Soybean	cytosol, plastid	30.87	29.49
KRH48992	Soybean	endoplasmic reticulum	21.92	28.99
KRH07958	Soybean	mitochondrion	8.72	27.66
KRH23930	Soybean	nucleus	26.62	25.87
KRH39865	Soybean	nucleus	26.4	25.16
KRH68719	Soybean	cytosol	21.03	25.13
KRH69109	Soybean	nucleus	22.82	24.46
KRG96957	Soybean	cytosol	20.13	24.32
KRH31669	Soybean	cytosol, mitochondrion	22.82	24.11
KRH33197	Soybean	cytosol, mitochondrion	21.03	24.1
KRH63082	Soybean	cytosol	21.92	21.78
KRH29958	Soybean	cytosol, mitochondrion	22.15	21.66
KRG99144	Soybean	cytosol, plastid	21.92	17.92
KRH63392	Soybean	cytosol	23.27	17.84
KRH56937	Soybean	cytosol	23.27	17.75
KRH45861	Soybean	plastid	21.03	17.18
KRH03447	Soybean	nucleus	22.6	17.18
KRH54515	Soybean	cytosol	22.37	17.12
KRH74806	Soybean	cytosol, plastid	18.34	14.56
KRH69321	Soybean	cytosol, mitochondrion	18.12	14.39
KRH51729	Soybean	cytosol	23.04	12.13
KRH61064	Soybean	nucleus	12.98	7.98

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100776656	MapMan:35.2	EMBL:ACUP02010370	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_17G130900
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7MLG0
EnsemblPlants:KRH03972	ProteinID:KRH03972	ProteinID:KRH03972.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0001BA8677
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:10477047..10481433

Molecular Weight (calculated)

48925.5 Da

IEP (calculated)

10.569

GRAVY (calculated)

-0.748

Length

447 amino acids

Sequence
(BLAST)

001: MGKASKWFRG LLGLKKTEYA TSPAKPPKEK RRWSFVKSSY TEKDNTTAAT CPPLRNNNNH AMAVAAATAA VAEAAVAAAE AAAVVVRLTS NSGRCADGGP
101: TRIRQHWAAV KIQAAFRGCL ARRALRALKG LVKLQALVRG HIERKRTAEW LKRLQALLHA QTQVSAGLTL HASPSSSKLS SHLQGPETPE KFESPIRSKS
201: MKHEHSPILK RNGSKSCALI NGYQEICGSR SESQGNEQLW NSGRSMNRAH GSNDERNGKV LEVDSGKPHF TLKRRNLSYS TGSDLYSKSL NSTKESTSLQ
301: SAQSPCCEVQ SHSYSSQKVN NEVEESPFCT ADNSPQYLSA SSKDDGFKRS PFTPTRSDGS RSYIRGYPDY PSYMACTESS KAKARSLSAP KQRPQSERSG
401: SSDRYSLNGF DMSRLATQRA MQASFTNKAY PGSGRLDKLG MPVGYRF

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.