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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 3
  • endoplasmic reticulum 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98787 Canola mitochondrion 48.97 80.07
CDX98786 Canola nucleus 77.48 78.95
CDX94150 Canola nucleus 73.97 77.16
Bra019337.1-P Field mustard nucleus 75.0 77.07
VIT_02s0025g04120.t01 Wine grape mitochondrion 46.69 45.75
GSMUA_Achr8P11920_001 Banana cytosol 33.68 45.4
KRH03972 Soybean cytosol 40.5 43.85
KRH57246 Soybean cytosol 39.05 42.47
KRH77498 Soybean cytosol, mitochondrion 34.5 42.17
AT3G51380.1 Thale cress mitochondrion 8.88 41.75
GSMUA_Achr5P20090_001 Banana cytosol, mitochondrion 39.46 41.61
Solyc08g007920.1.1 Tomato cytosol 20.04 41.45
Zm00001d002630_P002 Maize mitochondrion 39.05 41.36
GSMUA_Achr3P18210_001 Banana cytosol, mitochondrion 36.57 41.26
EES12687 Sorghum cytosol, mitochondrion 39.26 40.69
Solyc08g007930.1.1 Tomato cytosol 19.01 40.53
Os04t0569900-01 Rice cytosol, mitochondrion 38.84 40.52
Solyc08g080470.2.1 Tomato plastid 41.74 40.48
PGSC0003DMT400007855 Potato cytosol, plastid 41.74 40.4
GSMUA_Achr5P13660_001 Banana cytosol, mitochondrion 36.16 39.95
TraesCS2D01G398300.1 Wheat cytosol, mitochondrion 37.81 39.61
TraesCS2B01G418900.1 Wheat cytosol, mitochondrion 37.6 39.57
PGSC0003DMT400014796 Potato cytosol 28.31 38.06
Zm00001d026084_P001 Maize mitochondrion 38.43 37.5
GSMUA_Achr11P... Banana cytosol, mitochondrion 32.02 36.64
HORVU0Hr1G005320.2 Barley cytosol 27.07 35.99
AT5G62070.1 Thale cress cytosol, plastid 29.96 35.98
AT3G16490.1 Thale cress cytosol 26.24 32.65
AT5G07240.2 Thale cress plastid 29.13 31.54
AT1G51960.1 Thale cress cytosol, mitochondrion 21.07 29.06
AT4G29150.1 Thale cress mitochondrion 23.35 28.32
AT4G14750.3 Thale cress cytosol 21.69 22.83
AT5G03960.2 Thale cress cytosol, mitochondrion 19.01 22.77
AT5G13460.1 Thale cress nucleus 13.84 15.12
AT1G18840.1 Thale cress cytosol 16.53 13.99
AT1G74690.1 Thale cress cytosol 15.5 12.78
AT1G14380.1 Thale cress cytosol 14.26 10.39
AT2G02790.1 Thale cress cytosol 13.64 10.38
AT1G19870.1 Thale cress nucleus 14.46 8.82
Protein Annotations
Gene3D:1.20.5.190MapMan:35.2EntrezGene:828405ProteinID:AEE84701.1ArrayExpress:AT4G23060EnsemblPlantsGene:AT4G23060
RefSeq:AT4G23060TAIR:AT4G23060RefSeq:AT4G23060-TAIR-GEnsemblPlants:AT4G23060.1TAIR:AT4G23060.1EMBL:AY702664
InterPro:DUF4005GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0009719
GO:GO:0009739InterPro:IPR000048Symbol:IQD22InterPro:IQ_motif_EF-hand-BSRefSeq:NP_194037.2PFAM:PF00612
PFAM:PF13178PO:PO:0000013PO:PO:0000037PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PFscan:PS50096PANTHER:PTHR32295PANTHER:PTHR32295:SF13UniProt:Q2NNE0UniParc:UPI00005DC257SEG:seg
Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
Coordinates
chr4:+:12086898..12090714
Molecular Weight (calculated)
53477.9 Da
IEP (calculated)
10.792
GRAVY (calculated)
-0.731
Length
484 amino acids
Sequence
(BLAST)
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.