Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d017793_P001 | |
| Zm00001d051589_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62070.1 | Zm00001d017793_P001 | AT3G27960.1 | 21798944 |
| AT5G62070.1 | Zm00001d051589_P001 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12687 | Sorghum | cytosol, mitochondrion | 91.9 | 89.94 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 82.93 | 81.68 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 64.99 | 81.59 |
| Zm00001d026084_P001 | Maize | mitochondrion | 88.4 | 81.45 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 81.62 | 80.74 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 80.96 | 80.43 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 56.24 | 58.68 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 52.52 | 55.94 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 53.17 | 49.19 |
| KRH03972 | Soybean | cytosol | 43.54 | 44.52 |
| KRH57246 | Soybean | cytosol | 43.33 | 44.49 |
| Solyc08g080470.2.1 | Tomato | plastid | 48.58 | 44.49 |
| Solyc08g007920.1.1 | Tomato | cytosol | 22.32 | 43.59 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 47.48 | 43.4 |
| Solyc08g007930.1.1 | Tomato | cytosol | 21.23 | 42.73 |
| KRH77498 | Soybean | cytosol, mitochondrion | 36.76 | 42.42 |
| CDX78285 | Canola | plastid | 31.29 | 41.57 |
| Bra005929.1-P | Field mustard | plastid | 31.07 | 41.4 |
| KRG91452 | Soybean | cytosol | 41.14 | 41.23 |
| KRH35361 | Soybean | cytosol, mitochondrion | 40.92 | 40.3 |
| CDX98787 | Canola | mitochondrion | 26.04 | 40.2 |
| CDX98994 | Canola | mitochondrion | 31.07 | 40.11 |
| CDX70019 | Canola | cytosol, mitochondrion | 31.07 | 40.11 |
| Bra009281.1-P | Field mustard | mitochondrion | 31.07 | 40.11 |
| KRH09113 | Soybean | cytosol | 41.79 | 40.04 |
| CDY41368 | Canola | mitochondrion, plastid | 36.76 | 40.0 |
| CDY41252 | Canola | cytosol, mitochondrion | 42.01 | 39.34 |
| CDY53133 | Canola | nucleus | 41.79 | 39.3 |
| Bra019337.1-P | Field mustard | nucleus | 40.26 | 39.07 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 41.36 | 39.05 |
| KRH38565 | Soybean | cytosol | 41.14 | 39.0 |
| CDX94150 | Canola | nucleus | 39.39 | 38.79 |
| CDX76341 | Canola | mitochondrion, plastid | 35.45 | 38.57 |
| Bra020822.1-P | Field mustard | mitochondrion, plastid | 35.45 | 38.57 |
| CDX98786 | Canola | nucleus | 40.04 | 38.53 |
| Bra013672.1-P | Field mustard | mitochondrion, nucleus | 41.79 | 38.51 |
| VIT_16s0100g00620.t01 | Wine grape | cytosol | 27.57 | 37.84 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 40.04 | 37.65 |
| CDY00253 | Canola | plastid | 32.39 | 37.56 |
| CDX86928 | Canola | mitochondrion, plastid | 32.17 | 37.31 |
| CDX81042 | Canola | plastid | 31.51 | 37.21 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 32.6 | 36.97 |
| PGSC0003DMT400037043 | Potato | mitochondrion, nucleus | 38.29 | 36.76 |
| Bra010055.1-P | Field mustard | plastid | 32.39 | 36.54 |
| CDY00251 | Canola | plastid | 32.6 | 36.25 |
| Zm00001d048437_P002 | Maize | mitochondrion | 31.29 | 36.11 |
| PGSC0003DMT400014796 | Potato | cytosol | 28.45 | 36.11 |
| AT5G07240.2 | Thale cress | plastid | 31.95 | 32.66 |
| Zm00001d037688_P001 | Maize | mitochondrion | 32.17 | 31.82 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 31.73 | 30.92 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 31.95 | 30.87 |
| Zm00001d032932_P001 | Maize | mitochondrion | 28.45 | 30.37 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 31.95 | 30.35 |
| Zm00001d010795_P001 | Maize | cytosol, mitochondrion | 21.01 | 29.45 |
| Zm00001d008819_P001 | Maize | mitochondrion | 29.76 | 29.18 |
| Zm00001d029197_P001 | Maize | nucleus | 28.88 | 27.73 |
| Zm00001d041437_P001 | Maize | cytosol, mitochondrion | 26.04 | 26.86 |
| Zm00001d038793_P001 | Maize | cytosol | 21.66 | 26.05 |
| Zm00001d012767_P001 | Maize | cytosol, mitochondrion | 18.16 | 25.38 |
| Zm00001d043510_P001 | Maize | mitochondrion, nucleus | 22.32 | 24.88 |
| Zm00001d015969_P001 | Maize | cytosol, mitochondrion, plastid | 25.16 | 22.86 |
| Zm00001d048352_P001 | Maize | mitochondrion | 13.35 | 22.18 |
| Zm00001d038838_P001 | Maize | mitochondrion | 24.07 | 19.16 |
| Zm00001d011138_P003 | Maize | cytosol, plastid | 24.73 | 19.12 |
| Zm00001d043655_P002 | Maize | mitochondrion | 21.01 | 16.7 |
| Zm00001d026535_P003 | Maize | nucleus | 20.57 | 10.43 |
| Zm00001d001953_P003 | Maize | nucleus | 20.13 | 10.03 |
Protein Annotations
| EntrezGene:100281279 | MapMan:35.2 | UniProt:B6STZ4 | InterPro:DUF4005 | EMBL:EU956209 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ProteinID:ONM14828.1 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF52 | SMART:SM00015 | UniParc:UPI000182BBC1 |
| EnsemblPlantsGene:Zm00001d002630 | EnsemblPlants:Zm00001d002630_P002 | EnsemblPlants:Zm00001d002630_T002 | SEG:seg | : | : |
Description
Calmodulin binding protein
Coordinates
chr2:+:17337575..17339627
Molecular Weight (calculated)
49058.0 Da
IEP (calculated)
11.202
GRAVY (calculated)
-0.687
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWAPRWLRG LLGGGRKAAV TKPAKEKKLW GFGKSFREKD PAPAPERPRT PSVQPTATPR RGFAAAPDEA DDEQSKRAIA VAAATAAVAE AAVAAAQAAA
101: AVVRLTSSGR CPPPAAAKRE EWAAVRIQAA FRGYLARRAL KALRGLVKLQ ALVRGNIVRR QAAETLRCMH ALVRVQARAR ACRAIRSQHV AAHPDPPTPE
201: KYDQAGAPRH ARSGSLKANS SKTPGGERLG RERSESCGRN WLDRWVEERY TDDEKNAKIL EVDNGKPGRH GSKRRGGNHH QSPCSTMTSE QNSRSYATMP
301: ESPSKDSTTA QQSVPSPSSV GMAAEALSPL RVPADIAELC DSPQFFSATS RPGSSRRGGA FTPAAKSECS RSLFGGYSDC PNYMANTESF RAKARSQSAP
401: KQRPQQQYEK SGSLRRASAH ALAAGPAAAQ RSVASLHAMK AYPGSGRLDR LGMPVRY
101: AVVRLTSSGR CPPPAAAKRE EWAAVRIQAA FRGYLARRAL KALRGLVKLQ ALVRGNIVRR QAAETLRCMH ALVRVQARAR ACRAIRSQHV AAHPDPPTPE
201: KYDQAGAPRH ARSGSLKANS SKTPGGERLG RERSESCGRN WLDRWVEERY TDDEKNAKIL EVDNGKPGRH GSKRRGGNHH QSPCSTMTSE QNSRSYATMP
301: ESPSKDSTTA QQSVPSPSSV GMAAEALSPL RVPADIAELC DSPQFFSATS RPGSSRRGGA FTPAAKSECS RSLFGGYSDC PNYMANTESF RAKARSQSAP
401: KQRPQQQYEK SGSLRRASAH ALAAGPAAAQ RSVASLHAMK AYPGSGRLDR LGMPVRY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.