Factsheet for Zm00001d043510_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

cytosol 1
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33342	Sorghum	mitochondrion	80.98	83.84
Zm00001d012767_P001	Maize	cytosol, mitochondrion	60.49	75.84
HORVU3Hr1G070750.1	Barley	mitochondrion	33.66	55.2
TraesCS3A01G275900.1	Wheat	mitochondrion	49.27	54.01
TraesCS3B01G309600.1	Wheat	mitochondrion	48.78	53.05
HORVU3Hr1G070760.1	Barley	mitochondrion	49.02	53.03
TraesCS3D01G275900.1	Wheat	mitochondrion	48.05	51.84
Zm00001d010795_P001	Maize	cytosol, mitochondrion	39.76	50.0
Zm00001d038793_P001	Maize	cytosol	41.22	44.47
Os01t0743100-00	Rice	cytosol, mitochondrion	31.46	30.21
Zm00001d048437_P002	Maize	mitochondrion	23.9	24.75
Zm00001d037688_P001	Maize	mitochondrion	25.85	22.94
Zm00001d039510_P001	Maize	cytosol, mitochondrion	26.83	22.87
Zm00001d032932_P001	Maize	mitochondrion	23.66	22.66
Zm00001d008819_P001	Maize	mitochondrion	25.61	22.53
Zm00001d010366_P001	Maize	cytosol, mitochondrion	25.61	22.39
Zm00001d002630_P002	Maize	mitochondrion	24.88	22.32
Zm00001d033280_P001	Maize	cytosol, mitochondrion	24.63	21.35
Zm00001d026084_P001	Maize	mitochondrion	25.12	20.77
Zm00001d041437_P001	Maize	cytosol, mitochondrion	21.22	19.64
Zm00001d029197_P001	Maize	nucleus	22.44	19.33
Zm00001d048352_P001	Maize	mitochondrion	11.46	17.09
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	19.51	15.9
Zm00001d038838_P001	Maize	mitochondrion	19.02	13.59
Zm00001d011138_P003	Maize	cytosol, plastid	19.02	13.2
Zm00001d043655_P002	Maize	mitochondrion	18.05	12.87
Zm00001d001953_P003	Maize	nucleus	16.83	7.52
Zm00001d026535_P003	Maize	nucleus	16.1	7.33

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100381442	MapMan:35.2	UniProt:A0A1D6NCX1	InterPro:DUF4005	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ProteinID:ONM38336.1	ProteinID:ONM38337.1
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF17
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0004DE8AA5	EnsemblPlantsGene:Zm00001d043510	EnsemblPlants:Zm00001d043510_P001	EnsemblPlants:Zm00001d043510_T001
SEG:seg	:	:	:	:	:

Description

IQ-domain 25

Coordinates

chr3:-:202337387..202340106

Molecular Weight (calculated)

45683.8 Da

IEP (calculated)

11.416

GRAVY (calculated)

-0.909

Length

410 amino acids

Sequence
(BLAST)

001: MRRVVRWLRQ LLAGRKDERG GGLEVSHVGS GWSDGPEKEK RRWSFAKQRK SGGGGARSSG PDAVAPAAAV ERSQLVGRPG EDARAREHRA AIAIQKTFRG
101: YLARRALRAL RSLVKIQALV RGYLVRKQAT MTLHRLQTLM RLQADSIAVK NASYRRSMEQ EERVYARDVQ VKPLATAPVH RRMLSDSSDS IYERSPRIVE
201: MDTCHLRSRS SRITSRYNKY KYNPDGLPEY HHRHAAPTPS CSPLPGGNGK HQPARVSFRQ SARDRERDPR GSKTAQSTPR LASPHDSSSP AKSVEHSQLA
301: STPRRRPATQ RDRDRDALVS PRHMAGTASS AARTRCHSAP RQRKATDSEQ APSPRTGACC QEGASRRSCS HAHARGFCFQ CSESTRTDGL SGISVSDEVG
401: ARDYYLDSFW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.