Factsheet for Zm00001d033280_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93770	Sorghum	cytosol, mitochondrion	86.68	83.67
Os03t0636700-00	Rice	mitochondrion	67.44	71.36
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	68.92	70.56
TraesCS5A01G377500.1	Wheat	cytosol	68.5	70.13
TraesCS5D01G387500.1	Wheat	cytosol	68.5	69.98
HORVU5Hr1G093430.4	Barley	cytosol	69.13	69.87
GSMUA_Achr3P14930_001	Banana	cytosol	39.75	49.6
Zm00001d048437_P002	Maize	mitochondrion	40.59	48.48
GSMUA_Achr8P26800_001	Banana	cytosol	37.84	47.86
CDY36861	Canola	nucleus	35.73	45.19
CDY50677	Canola	nucleus	35.1	45.11
VIT_05s0020g03980.t01	Wine grape	cytosol	44.19	45.04
Bra039715.1-P	Field mustard	nucleus, plastid	35.1	44.86
Zm00001d032932_P001	Maize	mitochondrion	40.59	44.86
KRH35475	Soybean	cytosol	42.71	43.07
KRG91354	Soybean	cytosol, plastid	42.07	42.52
CDY29768	Canola	cytosol	15.01	42.52
Bra036898.1-P	Field mustard	cytosol	31.92	41.26
KRH69109	Soybean	nucleus	36.36	41.25
KRH31669	Soybean	cytosol, mitochondrion	36.79	41.13
Zm00001d041437_P001	Maize	cytosol, mitochondrion	38.48	41.08
CDY64325	Canola	cytosol	30.66	38.87
AT4G14750.3	Thale cress	cytosol	34.88	35.87
Zm00001d002630_P002	Maize	mitochondrion	30.87	31.95
VIT_14s0030g01880.t01	Wine grape	nucleus	26.0	31.46
Zm00001d010795_P001	Maize	cytosol, mitochondrion	20.72	30.06
Zm00001d010366_P001	Maize	cytosol, mitochondrion	29.18	29.42
Zm00001d026084_P001	Maize	mitochondrion	30.66	29.23
Zm00001d037688_P001	Maize	mitochondrion	28.54	29.22
KRH68719	Soybean	cytosol	22.41	28.34
KRG96957	Soybean	cytosol	21.99	28.11
Zm00001d008819_P001	Maize	mitochondrion	27.48	27.9
Zm00001d038793_P001	Maize	cytosol	21.99	27.37
Zm00001d039510_P001	Maize	cytosol, mitochondrion	27.7	27.23
Zm00001d012767_P001	Maize	cytosol, mitochondrion	18.39	26.61
Zm00001d043510_P001	Maize	mitochondrion, nucleus	21.35	24.63
Zm00001d029197_P001	Maize	nucleus	22.83	22.69
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	22.83	21.47
Zm00001d048352_P001	Maize	mitochondrion	11.63	20.0
Zm00001d011138_P003	Maize	cytosol, plastid	19.24	15.4
Zm00001d038838_P001	Maize	mitochondrion	18.18	14.98
Zm00001d043655_P002	Maize	mitochondrion	17.12	14.09
Zm00001d001953_P003	Maize	nucleus	17.97	9.27
Zm00001d026535_P003	Maize	nucleus	17.55	9.21

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100281119	MapMan:35.2	UniProt:B6SSD5	InterPro:DUF4005	EMBL:EU955650
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EMBL:KJ728509
ProteinID:ONM07138.1	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF37
SMART:SM00015	UniParc:UPI000182B0CD	EnsemblPlantsGene:Zm00001d033280	EnsemblPlants:Zm00001d033280_P001	EnsemblPlants:Zm00001d033280_T001	SEG:seg

Description

IQ calmodulin-binding motif family protein

Coordinates

chr1:-:257335467..257337638

Molecular Weight (calculated)

50517.7 Da

IEP (calculated)

11.089

GRAVY (calculated)

-0.527

Length

473 amino acids

Sequence
(BLAST)

001: MGKAGKWLRS FLPGSRRGRD NKAGALAPAA EPDLALALPL PGVATTPGST PGAKEKRRWS FRRPAAAASP GPGSAAAAKD VARGHLAPYG FLEPRVDPDQ
101: HAIAVAIATA AAAEAAMAAK QAAAVAARLS MSAPGSKRTV IGIEEAAAIK IQAVFRSYLA RKALCALRGL VKLQALVRGH LVRRQASHTL RCMQALVAAQ
201: NRARVERLRM LEDEKPVRTP RTTPGRRSSP HHPRFRHHHQ DTAEDNVKIV EVDTGAGGPE AHGTPRTSRR SSCYATPLCR TPSKNDLYQK ISPTPSALTD
301: ASARTYSGRY DDFSFATARA SPYRYAPSRQ QQQQQQHDDK PSAEYALLVP SYMANTESSR AKARSQSAPR QRLSVSSAAA EAAWQPSGRR RASLEAQAQA
401: TPAPRGQAPR YGPARVQRCP SQASAPAACP WGARLDRWSA SVHDSECGST STVMTAATTT YCWSLATDTA GMA

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.