Factsheet for Zm00001d038838_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22418	Sorghum	cytosol, plastid	89.37	88.6
Zm00001d011138_P003	Maize	cytosol, plastid	88.68	86.13
Os05t0535900-01	Rice	cytosol	75.61	75.61
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	71.08	70.47
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	71.08	70.47
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	70.03	69.43
HORVU1Hr1G080360.4	Barley	mitochondrion	70.03	68.25
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	8.19	52.22
Zm00001d043655_P002	Maize	mitochondrion	52.26	52.17
GSMUA_Achr4P30750_001	Banana	mitochondrion	19.69	42.16
GSMUA_Achr2P15790_001	Banana	cytosol	41.29	41.36
KRH56937	Soybean	cytosol	40.77	39.93
KRH03447	Soybean	nucleus	40.77	39.8
VIT_14s0108g00150.t01	Wine grape	nucleus	39.9	39.62
KRH54515	Soybean	cytosol	40.07	39.38
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	37.8	39.17
KRH63392	Soybean	cytosol	39.02	38.42
VIT_01s0026g01790.t01	Wine grape	cytosol	38.68	38.41
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	40.24	37.08
CDY41676	Canola	cytosol, plastid	33.62	33.57
Bra026581.1-P	Field mustard	cytosol	33.8	33.56
CDY67405	Canola	cytosol	33.8	33.51
CDY03037	Canola	cytosol	33.28	33.05
Solyc05g007130.2.1	Tomato	cytosol, plastid	31.71	33.03
KRH45861	Soybean	plastid	31.18	32.72
CDY04137	Canola	cytosol, plastid	32.06	32.68
CDY45197	Canola	nucleus, plastid	33.1	32.59
PGSC0003DMT400045444	Potato	cytosol, plastid	31.53	32.55
Bra024806.1-P	Field mustard	cytosol, plastid	33.1	32.48
CDY04138	Canola	cytosol, plastid	31.53	32.26
Bra017409.1-P	Field mustard	cytosol, plastid	31.36	31.86
CDY17427	Canola	cytosol, plastid	31.01	31.39
KRH74806	Soybean	cytosol, plastid	29.62	30.2
KRG99144	Soybean	cytosol, plastid	28.75	30.16
AT2G02790.1	Thale cress	cytosol	32.93	29.72
KRH69321	Soybean	cytosol, mitochondrion	28.75	29.31
CDY39317	Canola	cytosol	30.66	29.0
CDY49085	Canola	cytosol	30.84	28.87
AT1G14380.1	Thale cress	cytosol	33.1	28.61
Bra019653.1-P	Field mustard	cytosol	31.01	28.34
Zm00001d002630_P002	Maize	mitochondrion	19.16	24.07
Zm00001d026084_P001	Maize	mitochondrion	18.99	21.98
Zm00001d012767_P001	Maize	cytosol, mitochondrion	12.37	21.71
Zm00001d029197_P001	Maize	nucleus	17.07	20.59
Zm00001d038793_P001	Maize	cytosol	13.41	20.26
Zm00001d010795_P001	Maize	cytosol, mitochondrion	11.5	20.25
Zm00001d032932_P001	Maize	mitochondrion	14.98	20.09
Zm00001d048437_P002	Maize	mitochondrion	13.76	19.95
Zm00001d043510_P001	Maize	mitochondrion, nucleus	13.59	19.02
Zm00001d037688_P001	Maize	mitochondrion	14.98	18.61
Zm00001d010366_P001	Maize	cytosol, mitochondrion	15.16	18.55
Zm00001d033280_P001	Maize	cytosol, mitochondrion	14.98	18.18
Zm00001d008819_P001	Maize	mitochondrion	14.46	17.81
Zm00001d041437_P001	Maize	cytosol, mitochondrion	13.59	17.61
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	14.98	17.1
Zm00001d039510_P001	Maize	cytosol, mitochondrion	14.29	17.05
Zm00001d048352_P001	Maize	mitochondrion	8.01	16.73
Zm00001d001953_P003	Maize	nucleus	21.6	13.52
Zm00001d026535_P003	Maize	nucleus	20.91	13.32

Protein Annotations

EnsemblPlants:Zm00001d038838_P001	EnsemblPlants:Zm00001d038838_T001	EnsemblPlantsGene:Zm00001d038838	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF87
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:AQK88002.1	SEG:seg	SMART:SM00015
UniParc:UPI000842D7A5	UniProt:A0A1D6MB54	MapMan:35.1	:	:	:

Description

Calmodulin binding protein isoform 1%3B Calmodulin binding protein isoform 2

Coordinates

chr6:+:165588358..165592492

Molecular Weight (calculated)

62558.4 Da

IEP (calculated)

10.450

GRAVY (calculated)

-0.751

Length

574 amino acids

Sequence
(BLAST)

001: MGKSPAKWIK SVLFGKRSSS RSGSTKAKDL SKGTTNKAAA AAAAAAGKEP AFSESSPVIS EPVLVSAHNN ETAREAAKGE NSSVQEVPVT DVSQDLEKQG
101: TVGSDTSNDA ERLREEQAAV KAQAAFRGYL ARRAFRALKG IIRLQALIRG HLVRRQAVST LRATWLIVKF QALVRGRNVR LSNVSIQATT ELSQQNFGGS
201: KPGSWKEKLS SNAFARKLLS SPIVVEALHV QYDEMDPNSA FNWLERWTVS HVWKPISQPK RVGTDAKPHT RKASYAMETE SAKLKRNARK SPAVPFEPSQ
301: TNTTIENEKT RRNPRKLSST PAESVPDGQL TELEKVKRSL RKVTSSTVET SKVPSPTTEI PDRQEVQCER PLRSAKQAPI HVENQEPQNV NLSENAKMDI
401: LVPDIQPDVE VASDLVTITN EEKVDETPSV VAPAAEIMPL QDINSEENAL VNDVEERSKE EHSSTDNLKG SKRRSSFSAK PEYPENGSKN SPALPSYMAA
501: TQSAKAKLRG NSSPRLSSDS AEKNGFTRRH SLPSPNNGKI ISHSPRTQRP THAGGKDGAK GDKAMLSSRD ASGM

Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)

001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR

Arabidopsis Description

IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.