Factsheet for Solyc05g007130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 2
golgi 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045444	Potato	cytosol, plastid	92.56	91.73
Solyc02g087760.2.1	Tomato	nucleus	35.75	35.43
CDY45197	Canola	nucleus, plastid	35.21	33.28
CDY41676	Canola	cytosol, plastid	34.66	33.22
KRH74806	Soybean	cytosol, plastid	33.94	33.21
Os05t0535900-01	Rice	cytosol	34.48	33.1
Bra024806.1-P	Field mustard	cytosol, plastid	35.03	32.99
GSMUA_Achr8P26180_001	Banana	mitochondrion	31.4	32.95
KRH45861	Soybean	plastid	32.49	32.72
Bra026581.1-P	Field mustard	cytosol	34.3	32.7
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	34.3	32.64
CDY67405	Canola	cytosol	34.3	32.64
CDY17427	Canola	cytosol, plastid	33.58	32.63
Bra017409.1-P	Field mustard	cytosol, plastid	33.21	32.39
CDY03037	Canola	cytosol	33.94	32.35
CDY04137	Canola	cytosol, plastid	32.85	32.15
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	33.76	32.12
KRH69321	Soybean	cytosol, mitochondrion	32.67	31.97
CDY04138	Canola	cytosol, plastid	32.49	31.91
KXG22418	Sorghum	cytosol, plastid	33.39	31.78
Zm00001d038838_P001	Maize	mitochondrion	33.03	31.71
GSMUA_AchrUn_...	Banana	mitochondrion	29.04	31.62
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	33.21	31.61
Zm00001d011138_P003	Maize	cytosol, plastid	33.39	31.13
TraesCS3B01G276000.1	Wheat	cytosol, plastid	30.31	30.47
TraesCS3D01G247300.1	Wheat	cytosol, plastid	30.13	30.29
HORVU1Hr1G080360.4	Barley	mitochondrion	32.3	30.22
KRG99144	Soybean	cytosol, plastid	29.95	30.16
TraesCS3A01G244100.1	Wheat	cytosol, plastid	29.95	30.11
Os01t0716200-01	Rice	nucleus	31.03	29.79
HORVU3Hr1G067750.8	Barley	cytosol, plastid	29.95	29.68
KXG33252	Sorghum	cytosol	29.76	29.34
AT1G14380.1	Thale cress	cytosol	35.03	29.07
AT2G02790.1	Thale cress	cytosol	33.21	28.77
CDY39317	Canola	cytosol	31.4	28.5
Zm00001d043655_P002	Maize	mitochondrion	29.04	27.83
CDY49085	Canola	cytosol	30.67	27.57
Bra019653.1-P	Field mustard	cytosol	30.67	26.91
Solyc08g007920.1.1	Tomato	cytosol	9.98	23.5
Solyc08g007930.1.1	Tomato	cytosol	9.26	22.47
Solyc09g082560.2.1	Tomato	nucleus	17.24	20.34
Solyc06g066430.2.1	Tomato	nucleus	13.61	19.13
Solyc12g008520.1.1	Tomato	cytosol	13.61	18.34
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	13.25	17.8
Solyc08g080470.2.1	Tomato	plastid	15.97	17.64
Solyc01g088250.2.1	Tomato	cytosol, plastid	14.52	17.47
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	14.52	16.46
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	10.89	14.25
Solyc04g081210.2.1	Tomato	nucleus	21.23	13.57

Protein Annotations

EnsemblPlants:Solyc05g007130.2.1	EnsemblPlantsGene:Solyc05g007130.2	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002765A94	UniProt:K4BWN9
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:1694652..1699497

Molecular Weight (calculated)

60374.3 Da

IEP (calculated)

10.448

GRAVY (calculated)

-0.797

Length

551 amino acids

Sequence
(BLAST)

001: MGKSPGKWLR SLLPGKKSSK SGTSKKSSNE KASVISTNAA LSGSSVHLPL ISEPVACNAG GIKEDSNFEK GGVTNEVILP SIERDGDEQN TCLTLPEDTE
101: KMRLEQAATK AQAIVRGYLA RRAFLRLKGT IRLQAAVRGH LVRRQAVATL YCIHGIVKLQ ANIRGQIARR SSIGCELITK QGLEKQDAKQ LDYQRANASK
201: LARELSTNGF TTKLLASLPT GMPLHLHYGQ EEPNSSQEWL VRWTISQIWQ PRSKLETLPG KKHQNAEADI AMSKHSVRKV HSKKMQNGSN HSTSSGSEKK
301: KSSHLVNSVL QNPGSEIKKV KHSLKKTSSP ILEKPVQSEV DTERKRQSHD KSSSMASDEP LKNSEGTVEN STNVAPPPVV VDDTITHLDI LSVSDTHHKS
401: TTDAADQKSI TDNREDDTPV ANEDFCTNHD NNEGSESNKV NRRVSLPAKH DVDASTPTTR KVPSYMAPTK SAKAKLKEQA SPRFGQDVAE KNAVTRRHSL
501: PSPMNGKLSS SPSPRVQRLV QASAKEGIKI DRSLSSSRDG TDKMTRAEWK R

Best Arabidopsis Sequence Match ( AT1G14380.7 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFGEKEKDKA
401: DAVPIEFDIV KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG
501: EASPRFAQAK TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.