Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016500 | Potato | nucleus | 54.39 | 95.49 |
| GSMUA_Achr4P21190_001 | Banana | cytosol | 22.91 | 53.23 |
| Zm00001d048437_P002 | Maize | mitochondrion | 39.19 | 46.21 |
| TraesCS2D01G470000.1 | Wheat | cytosol, mitochondrion | 42.61 | 45.54 |
| Os03t0161400-01 | Rice | cytosol, mitochondrion | 39.83 | 45.37 |
| TraesCS2B01G492900.1 | Wheat | cytosol, mitochondrion | 41.97 | 44.95 |
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 41.33 | 44.47 |
| TraesCS2A01G470100.1 | Wheat | cytosol, mitochondrion | 41.33 | 44.47 |
| Os10t0420200-01 | Rice | mitochondrion | 32.12 | 44.12 |
| KXG40135 | Sorghum | cytosol, mitochondrion | 39.19 | 43.99 |
| Zm00001d032932_P001 | Maize | mitochondrion | 40.04 | 43.69 |
| TraesCS4A01G028700.1 | Wheat | cytosol, mitochondrion | 39.4 | 40.44 |
| OQU91764 | Sorghum | mitochondrion, plastid | 42.83 | 39.6 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 38.33 | 39.34 |
| TraesCS4B01G277100.2 | Wheat | cytosol, mitochondrion | 39.4 | 38.17 |
| TraesCS4D01G275700.3 | Wheat | cytosol, mitochondrion | 39.4 | 38.1 |
| HORVU2Hr1G106540.1 | Barley | cytosol, nucleus | 23.98 | 37.09 |
| Solyc08g007920.1.1 | Tomato | cytosol | 17.99 | 35.9 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 25.48 | 35.63 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 23.34 | 35.39 |
| Solyc12g008520.1.1 | Tomato | cytosol | 30.62 | 34.96 |
| Solyc08g007930.1.1 | Tomato | cytosol | 16.49 | 33.92 |
| Solyc06g066430.2.1 | Tomato | nucleus | 28.05 | 33.42 |
| Solyc08g080470.2.1 | Tomato | plastid | 30.19 | 28.26 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 26.77 | 25.72 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 21.41 | 24.39 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 20.34 | 22.57 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 22.06 | 22.49 |
| Solyc02g087760.2.1 | Tomato | nucleus | 22.7 | 19.06 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 20.34 | 17.24 |
| Solyc04g081210.2.1 | Tomato | nucleus | 21.63 | 11.72 |
Protein Annotations
| EnsemblPlants:Solyc09g082560.2.1 | EnsemblPlantsGene:Solyc09g082560.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF45 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI000276C157 | UniProt:K4CVN3 | MapMan:35.2 |
Description
No Description!
Coordinates
chr9:-:68279897..68282072
Molecular Weight (calculated)
52454.1 Da
IEP (calculated)
9.992
GRAVY (calculated)
-0.910
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTGRWIKN LLIGKKDKDK DKDKLEGEKI QNSITSNEHQ PTTPISIPST TPKDKKRWSF RRSSATPPGQ RDLSGTDIVA TTTAKQELLE SDNDHKKHVL
101: AVAAATAAAA DAAAAAAKAA AAAIQFTAAA RAYALEEDAA SKIQAVFRGY LARKALNALK GLVKLQALVR GHLVRKQAAA TLRCMQALVT VQARARAQRI
201: RMTEEENPNN PRQSVHRKST QDNKFRHSYQ DYEEDIKIVE MDLGESKGNT KSRNCYSNQG QTERTEHRFS THNAYTNQEH HQHIISPVPS AITEQSPKAY
301: SGHFEDYTSY PTTHSSPQYY NNTMSKPDPS RILYSSYARS EYAEPESLYN EYPFYPSYMA NTKSSIAKAR SHSAPKQRPD QTSFERQPSR RRPSIEGRNV
401: PRAVRMQRSS SHVGSTAQNY QYPWSIKLDK SNISINDSEC GSNCSVFTTH TNYCRSLVGF DVQEHRY
101: AVAAATAAAA DAAAAAAKAA AAAIQFTAAA RAYALEEDAA SKIQAVFRGY LARKALNALK GLVKLQALVR GHLVRKQAAA TLRCMQALVT VQARARAQRI
201: RMTEEENPNN PRQSVHRKST QDNKFRHSYQ DYEEDIKIVE MDLGESKGNT KSRNCYSNQG QTERTEHRFS THNAYTNQEH HQHIISPVPS AITEQSPKAY
301: SGHFEDYTSY PTTHSSPQYY NNTMSKPDPS RILYSSYARS EYAEPESLYN EYPFYPSYMA NTKSSIAKAR SHSAPKQRPD QTSFERQPSR RRPSIEGRNV
401: PRAVRMQRSS SHVGSTAQNY QYPWSIKLDK SNISINDSEC GSNCSVFTTH TNYCRSLVGF DVQEHRY
001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.