Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042595 | Potato | nucleus | 38.01 | 98.03 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 73.47 | 71.64 |
| KRH47199 | Soybean | cytosol | 68.88 | 68.18 |
| KRH44268 | Soybean | cytosol | 68.37 | 66.67 |
| Bra001633.1-P | Field mustard | cytosol | 53.06 | 55.76 |
| CDX75883 | Canola | cytosol | 53.32 | 55.73 |
| CDY43103 | Canola | cytosol | 52.3 | 55.71 |
| CDY68636 | Canola | cytosol | 55.1 | 55.53 |
| CDX82400 | Canola | cytosol | 52.81 | 55.5 |
| Bra021181.1-P | Field mustard | cytosol | 54.85 | 55.27 |
| Bra022163.1-P | Field mustard | cytosol | 53.83 | 54.52 |
| CDX92076 | Canola | cytosol | 53.83 | 54.52 |
| AT3G16490.1 | Thale cress | cytosol | 54.08 | 54.5 |
| CDY67178 | Canola | cytosol, mitochondrion | 53.32 | 53.87 |
| Solyc12g008520.1.1 | Tomato | cytosol | 53.06 | 50.86 |
| GSMUA_Achr10P... | Banana | cytosol | 55.36 | 49.21 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 46.68 | 48.8 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 48.98 | 47.29 |
| CDY46537 | Canola | cytosol, mitochondrion | 34.95 | 47.24 |
| Bra014304.1-P | Field mustard | cytosol, mitochondrion | 34.95 | 47.24 |
| CDY53440 | Canola | mitochondrion | 34.44 | 46.55 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 41.58 | 46.44 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 47.7 | 46.29 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 42.6 | 45.26 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 43.37 | 45.09 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 52.04 | 44.93 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 52.04 | 44.93 |
| CDY45643 | Canola | cytosol | 37.24 | 44.79 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 51.79 | 44.71 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 52.55 | 44.3 |
| Os05t0187500-01 | Rice | cytosol | 52.81 | 44.04 |
| Bra030407.1-P | Field mustard | cytosol | 37.76 | 43.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.35 | 43.8 |
| Zm00001d037688_P001 | Maize | mitochondrion | 51.28 | 43.51 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 50.51 | 42.22 |
| EES02320 | Sorghum | mitochondrion | 51.53 | 42.08 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 49.49 | 42.08 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 42.6 | 41.75 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 49.23 | 41.33 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 48.72 | 41.25 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 50.26 | 40.96 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 50.51 | 40.16 |
| Zm00001d008819_P001 | Maize | mitochondrion | 46.94 | 39.48 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 51.79 | 38.52 |
| Solyc08g007920.1.1 | Tomato | cytosol | 22.19 | 37.18 |
| Solyc08g007930.1.1 | Tomato | cytosol | 20.66 | 35.68 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 48.72 | 33.33 |
| Solyc09g082560.2.1 | Tomato | nucleus | 33.42 | 28.05 |
| Solyc08g080470.2.1 | Tomato | plastid | 34.18 | 26.85 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 31.63 | 25.51 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 24.23 | 23.17 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 22.96 | 21.38 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 23.98 | 20.52 |
| Solyc02g087760.2.1 | Tomato | nucleus | 21.17 | 14.93 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 19.13 | 13.61 |
| Solyc04g081210.2.1 | Tomato | nucleus | 24.49 | 11.14 |
Protein Annotations
| EnsemblPlants:Solyc06g066430.2.1 | EnsemblPlantsGene:Solyc06g066430.2 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI0002765D9E | UniProt:K4C7R9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:41700584..41702411
Molecular Weight (calculated)
43511.4 Da
IEP (calculated)
10.738
GRAVY (calculated)
-0.714
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKDKENVDN MSNSSDKRDK KRWSFGKSSK ESIGVGDNPV NFPGGVPAVD SNWLRSYISE NEKEQSKHAI AVAAATAAAA DAAVAAAQAA VAVVRLTSQG
101: RGAMFTGGRE KWAAAKIQTV FRGYLARKAL RALKGLVKLQ ALVRGYLVRK RAAATLHSMQ ALIRAQAAVR SQRARRSMTN DTRNQPETRA RRSIERFDEY
201: RSEFHSKRLS TSNDTSYDGF DESPKIVEID TFRTKSRSRR MNNACMSESG DEQHSQAMSS PLPCPLPARL SIPDCRHLQD VNWSFLADEQ CKFASAQTTP
301: RFAGSGRSNA PPTPAKSICG DGYFRAYANF PNYMSNTQSF RAKLRSHSAP KQRPEPGPKK RLSLNEIMAS RTSFSGVRMQ KSCSQVQEEY CF
101: RGAMFTGGRE KWAAAKIQTV FRGYLARKAL RALKGLVKLQ ALVRGYLVRK RAAATLHSMQ ALIRAQAAVR SQRARRSMTN DTRNQPETRA RRSIERFDEY
201: RSEFHSKRLS TSNDTSYDGF DESPKIVEID TFRTKSRSRR MNNACMSESG DEQHSQAMSS PLPCPLPARL SIPDCRHLQD VNWSFLADEQ CKFASAQTTP
301: RFAGSGRSNA PPTPAKSICG DGYFRAYANF PNYMSNTQSF RAKLRSHSAP KQRPEPGPKK RLSLNEIMAS RTSFSGVRMQ KSCSQVQEEY CF
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.