Factsheet for Bra030407.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45643	Canola	cytosol	95.55	98.77
Bra014304.1-P	Field mustard	cytosol, mitochondrion	63.8	74.14
AT1G51960.1	Thale cress	cytosol, mitochondrion	65.28	62.68
Bra001633.1-P	Field mustard	cytosol	44.81	40.48
Bra021181.1-P	Field mustard	cytosol	46.29	40.1
Bra022163.1-P	Field mustard	cytosol	45.7	39.79
Bra012855.1-P	Field mustard	mitochondrion	11.87	38.84
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	46.29	38.81
KRH47199	Soybean	cytosol	45.1	38.38
Solyc06g066430.2.1	Tomato	nucleus	43.92	37.76
KRH44268	Soybean	cytosol	44.21	37.06
PGSC0003DMT400042595	Potato	nucleus	15.13	33.55
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	34.42	30.93
Bra024161.1-P	Field mustard	mitochondrion	35.61	30.93
GSMUA_Achr10P...	Banana	cytosol	40.36	30.84
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	37.09	30.79
Os01t0190500-01	Rice	cytosol, mitochondrion	40.95	29.68
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	32.94	29.44
TraesCS1B01G142100.1	Wheat	cytosol	38.87	28.85
TraesCS1D01G123800.1	Wheat	cytosol	38.87	28.85
Os05t0187500-01	Rice	cytosol	40.06	28.72
TraesCS1A01G122900.1	Wheat	cytosol, plastid	38.58	28.63
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	33.83	28.5
GSMUA_AchrUn_...	Banana	cytosol	32.05	28.5
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	34.12	28.47
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	31.16	28.46
Zm00001d037688_P001	Maize	mitochondrion	38.58	28.14
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	38.28	27.98
Bra005929.1-P	Field mustard	plastid	28.19	27.7
TraesCS3B01G127100.1	Wheat	cytosol	37.98	27.65
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	37.69	27.19
Zm00001d010366_P001	Maize	cytosol, mitochondrion	37.69	27.08
Bra036812.1-P	Field mustard	mitochondrion	12.17	26.62
KXG21487	Sorghum	cytosol, mitochondrion	38.87	26.57
Bra009281.1-P	Field mustard	mitochondrion	27.6	26.27
EES02320	Sorghum	mitochondrion	36.8	25.83
Zm00001d008819_P001	Maize	mitochondrion	35.31	25.54
HORVU1Hr1G028250.6	Barley	mitochondrion	39.17	25.05
Zm00001d039510_P001	Maize	cytosol, mitochondrion	35.61	24.95
Bra039715.1-P	Field mustard	nucleus, plastid	27.3	24.86
Bra010055.1-P	Field mustard	plastid	28.19	23.46
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	37.98	22.34
Bra036898.1-P	Field mustard	cytosol	23.15	21.31
Bra028807.1-P	Field mustard	mitochondrion	22.85	20.26
Bra013672.1-P	Field mustard	mitochondrion, nucleus	29.38	19.96
Bra009498.1-P	Field mustard	cytosol, mitochondrion	22.55	19.9
Bra019337.1-P	Field mustard	nucleus	26.41	18.9
Bra020822.1-P	Field mustard	mitochondrion, plastid	23.15	18.57
Bra023414.1-P	Field mustard	nucleus	21.66	18.48
Bra006201.1-P	Field mustard	nucleus	21.96	16.55
Bra008163.1-P	Field mustard	cytosol	19.88	12.98
Bra025690.1-P	Field mustard	cytosol, mitochondrion	19.88	11.88
Bra026581.1-P	Field mustard	cytosol	19.88	11.59
Bra024806.1-P	Field mustard	cytosol, plastid	18.4	10.6
Bra017409.1-P	Field mustard	cytosol, plastid	16.91	10.09
Bra016536.1-P	Field mustard	nucleus	19.88	9.96
Bra016490.1-P	Field mustard	nucleus	21.07	9.61
Bra025777.1-P	Field mustard	nucleus, plastid	20.47	9.27
Bra019653.1-P	Field mustard	cytosol	16.91	9.08

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EnsemblPlantsGene:Bra030407	EnsemblPlants:Bra030407.1	EnsemblPlants:Bra030407.1-P	InterPro:DUF4005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4ENN7
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10	SMART:SM00015
UniParc:UPI0002547907	SEG:seg	:	:	:	:

Description

AT1G51960 (E=4e-088) IQD27 | IQD27 (IQ-domain 27); calmodulin binding

Coordinates

chrA05:-:10927199..10928409

Molecular Weight (calculated)

38054.6 Da

IEP (calculated)

10.948

GRAVY (calculated)

-0.716

Length

337 amino acids

Sequence
(BLAST)

001: MGGAVRWFKG LFSTKKRLVS GDGSDKEKEQ DKNAIAVATA AATAAEAVVS GAKAAAEMVR LTGEGRAGDI ITWEERWAAV KIQKVFRGSL ARKALRALKG
101: IVKLQALVRG YLVRKRAATM LHSIQALIRV QTAVRSKRDR RHKKEYSHMF QPRHSFDKFD EVAREERHQK IVEVHDMFKR RPKPRQTHNL VPMSEYEDGF
201: VYRGSDLELN LPKEKWKFGT AQSTPRLSSS SKFATTPRLT SSSHHHTANN NRYYVMQCPS KRVCGNAQSG YGMNTPGPGY MENTQSFKAK QRSHSAPHRL
301: SERNRLSLDE VIASKNRVSG GESLQQQRYS CSSYMIL

Best Arabidopsis Sequence Match ( AT1G51960.1 )
(BLAST)

001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L

Arabidopsis Description

IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.