Factsheet for Bra017409.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04137	Canola	cytosol, plastid	96.11	96.45
CDY04138	Canola	cytosol, plastid	95.04	95.72
CDY17427	Canola	cytosol, plastid	92.74	92.42
Bra024806.1-P	Field mustard	cytosol, plastid	81.59	78.8
Bra026581.1-P	Field mustard	cytosol	79.82	78.03
AT2G02790.1	Thale cress	cytosol	77.17	68.55
Bra019653.1-P	Field mustard	cytosol	51.33	46.18
PGSC0003DMT400045444	Potato	cytosol, plastid	32.74	33.27
Solyc05g007130.2.1	Tomato	cytosol, plastid	32.39	33.21
Os05t0535900-01	Rice	cytosol	33.63	33.1
Bra008163.1-P	Field mustard	cytosol	29.91	32.75
KRH74806	Soybean	cytosol, plastid	32.21	32.33
KXG22418	Sorghum	cytosol, plastid	32.92	32.12
KRH69321	Soybean	cytosol, mitochondrion	31.68	31.79
Zm00001d011138_P003	Maize	cytosol, plastid	32.92	31.47
Zm00001d038838_P001	Maize	mitochondrion	31.86	31.36
GSMUA_Achr8P26180_001	Banana	mitochondrion	29.03	31.24
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	31.68	30.92
KRG99144	Soybean	cytosol, plastid	29.91	30.9
KXG33252	Sorghum	cytosol	30.44	30.77
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	31.33	30.57
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	31.15	30.4
KRH45861	Soybean	plastid	29.2	30.16
HORVU1Hr1G080360.4	Barley	mitochondrion	31.33	30.05
GSMUA_AchrUn_...	Banana	mitochondrion	26.19	29.25
Zm00001d043655_P002	Maize	mitochondrion	29.38	28.87
TraesCS3B01G276000.1	Wheat	cytosol, plastid	27.96	28.83
Os01t0716200-01	Rice	nucleus	29.2	28.75
TraesCS3A01G244100.1	Wheat	cytosol, plastid	27.79	28.65
Bra025690.1-P	Field mustard	cytosol, mitochondrion	28.5	28.55
TraesCS3D01G247300.1	Wheat	cytosol, plastid	27.61	28.47
HORVU3Hr1G067750.8	Barley	cytosol, plastid	27.08	27.52
Bra012855.1-P	Field mustard	mitochondrion	4.96	27.18
Bra016536.1-P	Field mustard	nucleus	29.03	24.37
Bra039715.1-P	Field mustard	nucleus, plastid	13.63	20.81
Bra014304.1-P	Field mustard	cytosol, mitochondrion	10.09	19.66
Bra036898.1-P	Field mustard	cytosol	12.21	18.85
Bra036812.1-P	Field mustard	mitochondrion	5.13	18.83
Bra009281.1-P	Field mustard	mitochondrion	11.68	18.64
Bra005929.1-P	Field mustard	plastid	10.97	18.08
Bra023414.1-P	Field mustard	nucleus	11.86	16.96
Bra030407.1-P	Field mustard	cytosol	10.09	16.91
Bra001633.1-P	Field mustard	cytosol	10.8	16.35
Bra021181.1-P	Field mustard	cytosol	11.15	16.2
Bra006201.1-P	Field mustard	nucleus	12.74	16.11
Bra022163.1-P	Field mustard	cytosol	10.8	15.76
Bra010055.1-P	Field mustard	plastid	11.15	15.56
Bra024161.1-P	Field mustard	mitochondrion	10.27	14.95
Bra016490.1-P	Field mustard	nucleus	18.94	14.48
Bra028807.1-P	Field mustard	mitochondrion	9.73	14.47
Bra009498.1-P	Field mustard	cytosol, mitochondrion	9.56	14.14
Bra020822.1-P	Field mustard	mitochondrion, plastid	10.09	13.57
Bra013672.1-P	Field mustard	mitochondrion, nucleus	11.86	13.51
Bra025777.1-P	Field mustard	nucleus, plastid	17.35	13.17
Bra019337.1-P	Field mustard	nucleus	10.62	12.74

Protein Annotations

EnsemblPlants:Bra017409.1	EnsemblPlants:Bra017409.1-P	EnsemblPlantsGene:Bra017409	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	UniParc:UPI00025422BD	UniProt:M4DLM8	MapMan:35.1

Description

AT2G02790 (E=2e-187) IQD29 | IQD29 (IQ-domain 29); calmodulin binding

Coordinates

chrA09:-:15081219..15083251

Molecular Weight (calculated)

61425.4 Da

IEP (calculated)

10.326

GRAVY (calculated)

-0.886

Length

565 amino acids

Sequence
(BLAST)

001: MGKTPSPGKS IKSLLGKKSS KSTLDKGTDK LRSAKKEDLV VKVKDNNNVS TLPTNPSPVV SSQEVAATQT VLVPDAAVPE NQPSRDINEP NANPESVNDT
101: EELKLEEDAT KDREEFQMLK GVIKLQAVIR GHLVRRQAVA TYSCIWGIVK FQALVRGKIA RSSVTGVQLQ KSNPQTLQGS TYNWLEGFTK LSMIDKLLVS
201: SPTVSPLKIQ YGPEDPNSAK VWLERWTQLQ VWSPGPLVIK SLVPKSQTKK RSFQAVEADK GKLKRGIKKP PGGLNTGSGS SSSRSTAEKQ SVRKASTLGK
301: EVSNDKPKQS SRKSTSAIKE GSSSLEVKDE KPRISLKKAN GIEVKPTRKS AEKKKEVVAS VQKEVPGDKV SSSVVDTPEE EEEVKDSPET VSKEVDLDKD
401: DKSPVLGTPE QDELKTEEKN DKAEEEIQEP DVQVSSENGN AASENTKQSD RRASLPAKIE NHHQDDGVTH SGRKIPSYMA PTASAKARVR GGQGSPRFGG
501: QEKPEKNGIT RRHSLPPGPN GKLSAMSPRA HRLLIASTKG SVNSDRSFSS SKDIGDKSTK AEWKR

Best Arabidopsis Sequence Match ( AT2G02790.3 )
(BLAST)

001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR

Arabidopsis Description

IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.