Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024806.1-P | Field mustard | cytosol, plastid | 73.27 | 79.66 |
| CDY45197 | Canola | nucleus, plastid | 72.64 | 79.25 |
| CDY67405 | Canola | cytosol | 72.01 | 79.1 |
| Bra026581.1-P | Field mustard | cytosol | 71.86 | 79.07 |
| CDY04137 | Canola | cytosol, plastid | 69.5 | 78.51 |
| CDY04138 | Canola | cytosol, plastid | 69.03 | 78.25 |
| CDY03037 | Canola | cytosol | 71.07 | 78.2 |
| CDY41676 | Canola | cytosol, plastid | 70.44 | 77.91 |
| CDY17427 | Canola | cytosol, plastid | 68.87 | 77.25 |
| Bra017409.1-P | Field mustard | cytosol, plastid | 68.55 | 77.17 |
| AT1G14380.1 | Thale cress | cytosol | 55.03 | 52.71 |
| PGSC0003DMT400045444 | Potato | cytosol, plastid | 29.25 | 33.45 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 28.77 | 33.21 |
| Os05t0535900-01 | Rice | cytosol | 29.87 | 33.1 |
| KXG22418 | Sorghum | cytosol, plastid | 30.03 | 32.99 |
| Zm00001d038838_P001 | Maize | mitochondrion | 29.72 | 32.93 |
| Zm00001d011138_P003 | Maize | cytosol, plastid | 30.35 | 32.66 |
| GSMUA_Achr8P26180_001 | Banana | mitochondrion | 26.26 | 31.81 |
| TraesCS1A01G357500.3 | Wheat | cytosol, mitochondrion, plastid | 28.77 | 31.61 |
| TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 28.62 | 31.43 |
| KRH74806 | Soybean | cytosol, plastid | 27.67 | 31.26 |
| TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 28.3 | 31.09 |
| AT1G74690.1 | Thale cress | cytosol | 28.62 | 31.01 |
| KRH69321 | Soybean | cytosol, mitochondrion | 27.36 | 30.91 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 24.53 | 30.83 |
| AT1G18840.1 | Thale cress | cytosol | 27.67 | 30.77 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 28.3 | 30.56 |
| KRH45861 | Soybean | plastid | 25.94 | 30.16 |
| AT3G51380.1 | Thale cress | mitochondrion | 4.87 | 30.1 |
| KRG99144 | Soybean | cytosol, plastid | 25.79 | 29.98 |
| Os01t0716200-01 | Rice | nucleus | 26.73 | 29.62 |
| TraesCS3A01G244100.1 | Wheat | cytosol, plastid | 25.47 | 29.56 |
| KXG33252 | Sorghum | cytosol | 25.94 | 29.52 |
| TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 25.31 | 29.38 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 25.63 | 29.32 |
| TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 25.0 | 29.01 |
| Zm00001d043655_P002 | Maize | mitochondrion | 25.79 | 28.52 |
| AT5G13460.1 | Thale cress | nucleus | 12.58 | 18.06 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 9.91 | 17.95 |
| AT4G14750.3 | Thale cress | cytosol | 12.11 | 16.74 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 10.38 | 16.38 |
| AT3G16490.1 | Thale cress | cytosol | 9.91 | 16.2 |
| AT5G07240.2 | Thale cress | plastid | 11.01 | 15.66 |
| AT4G29150.1 | Thale cress | mitochondrion | 9.59 | 15.29 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 9.12 | 14.36 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 10.38 | 13.64 |
| AT1G19870.1 | Thale cress | nucleus | 15.41 | 12.34 |
Protein Annotations
| MapMan:35.1 | EntrezGene:814808 | ProteinID:AEC05624.1 | ArrayExpress:AT2G02790 | EnsemblPlantsGene:AT2G02790 | RefSeq:AT2G02790 |
| TAIR:AT2G02790 | RefSeq:AT2G02790-TAIR-G | EnsemblPlants:AT2G02790.1 | TAIR:AT2G02790.1 | Unigene:At.51202 | InterPro:DUF4005 |
| UniProt:F4IRA9 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005875 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 |
| InterPro:IPR000048 | Symbol:IQD29 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_178382.2 | PFAM:PF00612 | PFAM:PF13178 |
| PO:PO:0000293 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF48 | SMART:SM00015 | UniParc:UPI000034ED8A |
| SEG:seg | : | : | : | : | : |
Description
IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
Coordinates
chr2:+:787915..790946
Molecular Weight (calculated)
69764.6 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.831
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGGKR FKPITIHKPF
601: CQFLLHYLHP FNKFSSCLYQ TSRRKLSGNG ESTKAE
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGGKR FKPITIHKPF
601: CQFLLHYLHP FNKFSSCLYQ TSRRKLSGNG ESTKAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.