Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39317 | Canola | cytosol | 62.95 | 68.86 |
| CDY49085 | Canola | cytosol | 62.2 | 67.37 |
| Bra019653.1-P | Field mustard | cytosol | 62.2 | 65.76 |
| AT2G02790.1 | Thale cress | cytosol | 52.71 | 55.03 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 29.07 | 35.03 |
| AT3G51380.1 | Thale cress | mitochondrion | 5.42 | 34.95 |
| PGSC0003DMT400045444 | Potato | cytosol, plastid | 28.77 | 34.35 |
| KXG22418 | Sorghum | cytosol, plastid | 29.22 | 33.51 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 25.45 | 33.4 |
| Zm00001d038838_P001 | Maize | mitochondrion | 28.61 | 33.1 |
| GSMUA_Achr8P26180_001 | Banana | mitochondrion | 25.75 | 32.57 |
| KRH45861 | Soybean | plastid | 26.81 | 32.54 |
| Os05t0535900-01 | Rice | cytosol | 28.01 | 32.4 |
| Zm00001d011138_P003 | Maize | cytosol, plastid | 28.46 | 31.98 |
| TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 27.86 | 31.95 |
| TraesCS1A01G357500.3 | Wheat | cytosol, mitochondrion, plastid | 27.86 | 31.95 |
| TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 27.56 | 31.61 |
| KRH74806 | Soybean | cytosol, plastid | 26.66 | 31.44 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 27.86 | 31.41 |
| KRH69321 | Soybean | cytosol, mitochondrion | 26.2 | 30.91 |
| KXG33252 | Sorghum | cytosol | 25.6 | 30.41 |
| Os01t0716200-01 | Rice | nucleus | 26.2 | 30.31 |
| KRG99144 | Soybean | cytosol, plastid | 24.7 | 29.98 |
| AT1G18840.1 | Thale cress | cytosol | 25.6 | 29.72 |
| AT1G74690.1 | Thale cress | cytosol | 26.05 | 29.47 |
| TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 24.25 | 29.38 |
| TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 24.1 | 29.2 |
| TraesCS3A01G244100.1 | Wheat | cytosol, plastid | 24.1 | 29.2 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 23.8 | 28.42 |
| Zm00001d043655_P002 | Maize | mitochondrion | 24.4 | 28.17 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 10.09 | 19.09 |
| AT5G13460.1 | Thale cress | nucleus | 12.05 | 18.06 |
| AT3G16490.1 | Thale cress | cytosol | 10.39 | 17.74 |
| AT4G14750.3 | Thale cress | cytosol | 11.9 | 17.17 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 10.39 | 17.12 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 10.09 | 16.58 |
| AT4G29150.1 | Thale cress | mitochondrion | 9.94 | 16.54 |
| AT5G07240.2 | Thale cress | plastid | 10.54 | 15.66 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 10.39 | 14.26 |
| AT1G19870.1 | Thale cress | nucleus | 15.96 | 13.35 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.1 | EntrezGene:838000 | ProteinID:AEE29154.1 | ProteinID:AEE29156.1 | EMBL:AK117145 |
| ProteinID:ANM61047.1 | ArrayExpress:AT1G14380 | EnsemblPlantsGene:AT1G14380 | RefSeq:AT1G14380 | TAIR:AT1G14380 | RefSeq:AT1G14380-TAIR-G |
| EnsemblPlants:AT1G14380.1 | TAIR:AT1G14380.1 | Unigene:At.70085 | EMBL:BT005935 | InterPro:DUF4005 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005875 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR000048 | Symbol:IQD28 |
| InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_001031046.1 | RefSeq:NP_001323290.1 | RefSeq:NP_563950.1 | PFAM:PF00612 | PFAM:PF13178 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF48 | UniProt:Q8GZ87 | SMART:SM00015 | UniParc:UPI0000060DBB |
| SEG:seg | : | : | : | : | : |
Description
IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
Coordinates
chr1:-:4918010..4921682
Molecular Weight (calculated)
72852.6 Da
IEP (calculated)
10.062
GRAVY (calculated)
-0.881
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFAEKEKDTT
401: DSVQIESEGK VSGNVLEGGE GENIVFTEKE KDTADPVQIE PERKVLEEGD NIESSGKEKD TGDSVQIESE GKVLEGGDNI EFGEKEKDKA DAVPIEFDIV
501: KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG EASPRFAQAK
601: TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFAEKEKDTT
401: DSVQIESEGK VSGNVLEGGE GENIVFTEKE KDTADPVQIE PERKVLEEGD NIESSGKEKD TGDSVQIESE GKVLEGGDNI EFGEKEKDKA DAVPIEFDIV
501: KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG EASPRFAQAK
601: TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.