CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49085	Canola	cytosol	89.79	88.91
Bra019653.1-P	Field mustard	cytosol	89.46	86.47
AT1G14380.1	Thale cress	cytosol	68.86	62.95
CDY04137	Canola	cytosol, plastid	48.93	52.75
CDY04138	Canola	cytosol, plastid	48.43	52.41
CDY67405	Canola	cytosol	49.92	52.33
CDY41676	Canola	cytosol, plastid	49.26	52.0
CDY03037	Canola	cytosol	49.26	51.73
CDY45197	Canola	nucleus, plastid	49.59	51.63
CDY17427	Canola	cytosol, plastid	47.61	50.97
CDX90650	Canola	mitochondrion	5.6	33.01
CDY29016	Canola	mitochondrion	5.44	32.04
Solyc05g007130.2.1	Tomato	cytosol, plastid	28.5	31.4
PGSC0003DMT400045444	Potato	cytosol, plastid	28.34	30.94
KXG22418	Sorghum	cytosol, plastid	29.49	30.92
Zm00001d038838_P001	Maize	mitochondrion	29.0	30.66
GSMUA_AchrUn_...	Banana	mitochondrion	25.37	30.43
Os05t0535900-01	Rice	cytosol	28.01	29.62
GSMUA_Achr8P26180_001	Banana	mitochondrion	25.37	29.33
Zm00001d011138_P003	Maize	cytosol, plastid	28.5	29.27
TraesCS3B01G276000.1	Wheat	cytosol, plastid	26.03	28.83
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	27.18	28.5
TraesCS3A01G244100.1	Wheat	cytosol, plastid	25.7	28.47
TraesCS3D01G247300.1	Wheat	cytosol, plastid	25.7	28.47
KXG33252	Sorghum	cytosol	26.19	28.44
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	27.02	28.32
KRH45861	Soybean	plastid	25.37	28.15
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	26.69	27.98
KRH74806	Soybean	cytosol, plastid	25.54	27.53
Os01t0716200-01	Rice	nucleus	25.86	27.35
HORVU1Hr1G080360.4	Barley	mitochondrion	26.52	27.33
HORVU3Hr1G067750.8	Barley	cytosol, plastid	24.88	27.16
Zm00001d043655_P002	Maize	mitochondrion	25.7	27.13
CDY26720	Canola	cytosol, mitochondrion	24.55	26.42
KRH69321	Soybean	cytosol, mitochondrion	24.38	26.29
CDX83805	Canola	cytosol, mitochondrion	24.05	26.16
CDX73724	Canola	mitochondrion	5.6	26.15
KRG99144	Soybean	cytosol, plastid	23.39	25.96
CDY19251	Canola	cytosol, mitochondrion	23.56	25.54
CDX78003	Canola	mitochondrion	6.1	24.34
CDY29768	Canola	cytosol	6.43	23.35
CDX96693	Canola	nucleus	24.38	21.99
CDY53440	Canola	mitochondrion	9.23	19.31
CDY50677	Canola	nucleus	11.7	19.29
CDY36861	Canola	nucleus	11.7	18.98
CDY46537	Canola	cytosol, mitochondrion	9.06	18.97
CDY72577	Canola	cytosol, mitochondrion	8.73	18.28
CDY45643	Canola	cytosol	9.23	17.18
CDY64325	Canola	cytosol	10.38	16.89
CDX98787	Canola	mitochondrion	8.07	16.55
CDY41423	Canola	cytosol, mitochondrion	7.91	16.38
CDX98994	Canola	mitochondrion	9.39	16.1
CDX70272	Canola	cytosol, mitochondrion	7.74	16.04
CDX70019	Canola	cytosol, mitochondrion	9.23	15.82
CDY41417	Canola	mitochondrion	7.74	15.72
CDX78285	Canola	plastid	8.9	15.7
CDY00253	Canola	plastid	9.72	14.97
CDY43103	Canola	cytosol	9.06	14.95
CDY68636	Canola	cytosol	9.56	14.91
CDY41368	Canola	mitochondrion, plastid	10.21	14.76
CDX82400	Canola	cytosol	9.06	14.75
CDX86928	Canola	mitochondrion, plastid	9.56	14.72
CDY67178	Canola	cytosol, mitochondrion	9.39	14.69
CDX75883	Canola	cytosol	9.06	14.67
CDX92076	Canola	cytosol	9.23	14.47
CDX85648	Canola	nucleus	9.39	14.43
CDY00251	Canola	plastid	9.72	14.36
CDY30233	Canola	mitochondrion	9.06	14.18
CDX70505	Canola	nucleus	10.38	14.13
CDX78523	Canola	nucleus	10.38	14.13
CDX81042	Canola	plastid	8.9	13.95
CDX98786	Canola	nucleus	10.87	13.89
CDX91120	Canola	nucleus	8.57	13.87
CDX76341	Canola	mitochondrion, plastid	9.56	13.81
CDX94150	Canola	nucleus	10.54	13.79
CDY41252	Canola	cytosol, mitochondrion	11.04	13.73
CDY47784	Canola	mitochondrion	8.73	13.66
CDY53133	Canola	nucleus	10.87	13.58
CDY14162	Canola	endoplasmic reticulum	7.41	13.43
CDY04907	Canola	endoplasmic reticulum	7.41	13.43
CDX83739	Canola	nucleus	15.49	12.72
CDY62588	Canola	nucleus	15.32	12.55
CDY44186	Canola	nucleus, plastid	14.99	12.45
CDY29389	Canola	nucleus, plastid	14.33	11.63
CDX75112	Canola	cytosol	0.82	3.6

Protein Annotations

EnsemblPlants:CDY39317	EnsemblPlantsGene:GSBRNA2T00067735001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48	PFAM:PF00612	PFscan:PS50096	ProteinID:CDY39317
ProteinID:CDY39317.1	SEG:seg	SMART:SM00015	UniParc:UPI0004EDFFF2	UniProt:A0A078HN63	MapMan:35.1

Description

BnaC05g10620DBnaC05g10620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN63]

Coordinates

chrLK032445:+:114777..117834

Molecular Weight (calculated)

66596.2 Da

IEP (calculated)

9.823

GRAVY (calculated)

-0.864

Length

607 amino acids

Sequence
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNLVVSAVKD DFSNLSLDPP VASSQPDTAS SAQNVVPPSN GDDLEPRSDV DELKLGQAAS KIQAVFRARQ ARRAIRTLKG
101: IIRLQAVIRG HLVRRQAVAT YSCIWGIVKF QALVRGRIAR SSSDSVVQCH KPNMEVNDSE ALQVSMCSWM NDPSKFIIVR KLLASSPTAL PLKIQYGPEE
201: PNSANVWLER WTQLHVWSPP PRVAKILVPQ TKTKKRSYQA VVDSEKARPK QGVKKQSVPA SGKGSNRSST TESEKPKRST VRKASTLSKD PLRIESDKAK
301: HKPRKSRSAA SKEEVKEEKP RPSLKRSSLS NSSLKVTRKS AEKRKETVDS VQIEPEVKVS DNVESAEKEK DAADCVQIEP EVKVLDVLEG GGDDVESAEK
401: EKDTAESVQI EPEVRVSGVL EEGGDAVESA EKEKDSADSV QMETEVKVSD DLQGGEKEKD TTDVVAKELG VEEKEKSSEE DELRTTETND KDEEDLKCSD
501: VKVSSENGNI SSDNSKPSER RVSPHYQDEG RTHSGRKIHS YMAPTASTLR RHSLPSPANG KPGVTTTMSP RAHKLLLASA KGSMNGDKSA SSSKNKSDKS
601: NKTEWKR

Best Arabidopsis Sequence Match ( AT1G14380.1 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEGGDNI EFAEKEKDTT
401: DSVQIESEGK VSGNVLEGGE GENIVFTEKE KDTADPVQIE PERKVLEEGD NIESSGKEKD TGDSVQIESE GKVLEGGDNI EFGEKEKDKA DAVPIEFDIV
501: KDEKSPVLDR TEEDELKTAE TSDKAEALKC ADVKVSSENG NVGSDNTKQS EKRALLPANI DKQDDGLTLS GRKIPSYMAP TASAKARVKG EASPRFAQAK
601: TEINGALRRH SLPSPANGKL STTTMSPRAQ KLLLASAKGS MNGDKSFTSS KDITHKSTRT DWKR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.