Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14162 | Canola | endoplasmic reticulum | 100.0 | 100.0 |
| CDX70272 | Canola | cytosol, mitochondrion | 72.24 | 82.59 |
| CDY41423 | Canola | cytosol, mitochondrion | 71.64 | 81.91 |
| CDY72577 | Canola | cytosol, mitochondrion | 70.15 | 81.03 |
| Bra028807.1-P | Field mustard | mitochondrion | 84.18 | 74.21 |
| CDY41417 | Canola | mitochondrion | 51.64 | 57.86 |
| KRH33197 | Soybean | cytosol, mitochondrion | 41.19 | 35.38 |
| CDX90650 | Canola | mitochondrion | 10.15 | 33.01 |
| CDY29016 | Canola | mitochondrion | 9.85 | 32.04 |
| VIT_08s0007g05960.t01 | Wine grape | cytosol | 40.6 | 32.0 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 38.21 | 31.6 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 37.61 | 30.73 |
| CDY29768 | Canola | cytosol | 14.03 | 28.14 |
| VIT_08s0007g05980.t01 | Wine grape | cytosol | 37.61 | 27.88 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 33.43 | 26.6 |
| CDX73724 | Canola | mitochondrion | 10.15 | 26.15 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 31.94 | 23.83 |
| CDX91120 | Canola | nucleus | 26.57 | 23.73 |
| CDY46537 | Canola | cytosol, mitochondrion | 20.3 | 23.45 |
| CDX85648 | Canola | nucleus | 27.46 | 23.29 |
| CDX78003 | Canola | mitochondrion | 10.45 | 23.03 |
| CDY53440 | Canola | mitochondrion | 19.7 | 22.76 |
| CDX78285 | Canola | plastid | 22.39 | 21.8 |
| CDX70019 | Canola | cytosol, mitochondrion | 22.69 | 21.47 |
| CDX98994 | Canola | mitochondrion | 22.69 | 21.47 |
| CDY45643 | Canola | cytosol | 20.6 | 21.17 |
| CDY43103 | Canola | cytosol | 22.99 | 20.92 |
| CDX70505 | Canola | nucleus | 27.76 | 20.85 |
| CDX82400 | Canola | cytosol | 22.99 | 20.64 |
| CDX78523 | Canola | nucleus | 27.46 | 20.63 |
| CDX75883 | Canola | cytosol | 22.99 | 20.53 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 28.96 | 20.38 |
| CDY00253 | Canola | plastid | 23.88 | 20.3 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 28.66 | 20.17 |
| CDX92076 | Canola | cytosol | 23.28 | 20.16 |
| CDY68636 | Canola | cytosol | 23.28 | 20.05 |
| CDX86928 | Canola | mitochondrion, plastid | 23.58 | 20.05 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 28.66 | 20.0 |
| Os03t0355700-00 | Rice | cytosol | 26.87 | 19.96 |
| CDX81042 | Canola | plastid | 22.69 | 19.64 |
| Zm00001d029197_P001 | Maize | nucleus | 27.76 | 19.54 |
| CDY00251 | Canola | plastid | 23.88 | 19.46 |
| CDY67178 | Canola | cytosol, mitochondrion | 22.39 | 19.33 |
| CDY30233 | Canola | mitochondrion | 22.39 | 19.33 |
| CDY47784 | Canola | mitochondrion | 22.39 | 19.33 |
| EER94844 | Sorghum | cytosol | 28.66 | 19.24 |
| CDY41368 | Canola | mitochondrion, plastid | 21.79 | 17.38 |
| CDX76341 | Canola | mitochondrion, plastid | 21.19 | 16.9 |
| CDY53133 | Canola | nucleus | 24.48 | 16.87 |
| CDX94150 | Canola | nucleus | 23.28 | 16.81 |
| CDY41252 | Canola | cytosol, mitochondrion | 24.48 | 16.8 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 27.46 | 16.55 |
| CDX98786 | Canola | nucleus | 22.09 | 15.58 |
| CDY50677 | Canola | nucleus | 16.42 | 14.95 |
| CDY36861 | Canola | nucleus | 16.42 | 14.71 |
| CDY64325 | Canola | cytosol | 15.52 | 13.94 |
| PGSC0003DMT400021096 | Potato | nucleus | 8.96 | 13.57 |
| CDX98787 | Canola | mitochondrion | 10.15 | 11.49 |
| CDY26720 | Canola | cytosol, mitochondrion | 14.63 | 8.69 |
| CDY19251 | Canola | cytosol, mitochondrion | 14.33 | 8.57 |
| CDX83805 | Canola | cytosol, mitochondrion | 13.13 | 7.89 |
| CDY49085 | Canola | cytosol | 13.73 | 7.5 |
| CDY41676 | Canola | cytosol, plastid | 12.84 | 7.48 |
| CDY39317 | Canola | cytosol | 13.43 | 7.41 |
| CDY03037 | Canola | cytosol | 12.24 | 7.09 |
| CDY67405 | Canola | cytosol | 12.24 | 7.08 |
| CDY44186 | Canola | nucleus, plastid | 14.63 | 6.7 |
| CDY45197 | Canola | nucleus, plastid | 11.64 | 6.69 |
| CDX96693 | Canola | nucleus | 13.43 | 6.69 |
| CDY04138 | Canola | cytosol, plastid | 10.75 | 6.42 |
| CDY29389 | Canola | nucleus, plastid | 14.33 | 6.42 |
| CDY04137 | Canola | cytosol, plastid | 10.75 | 6.39 |
| CDX83739 | Canola | nucleus | 14.03 | 6.36 |
| CDY62588 | Canola | nucleus | 13.43 | 6.07 |
| CDY17427 | Canola | cytosol, plastid | 10.15 | 6.0 |
| CDX75112 | Canola | cytosol | 1.49 | 3.6 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | GO:A0A078EVA0 | UniProt:A0A078EVA0 | EnsemblPlants:CDY04907 | ProteinID:CDY04907 |
| ProteinID:CDY04907.1 | ProteinID:CDY14162.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00119628001 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PFAM:PF00612 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF41 |
| SMART:SM00015 | TMHMM:TMhelix | UniParc:UPI0004EDBACF | SEG:seg | : | : |
Description
BnaAnng00890DBnaAnng00890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EVA0]
Coordinates
chrLK031958:-:635576..637303
Molecular Weight (calculated)
38058.8 Da
IEP (calculated)
11.736
GRAVY (calculated)
-0.338
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSSSAISI RQCIVMLLSI MLMSRFFIQV IIDQLNKRLY HLSPGNFIVM AKRSSWFGWI KRLFTCEAKA KAEKKSRRLR WVFRRLKLKH QISTRVQETR
101: TLNQATEDQR KHAMNVAIAT AAAAEAAVAA AKAAAEVVRM AGNAFTSQHF VKKRDTNLAA IKIQSAFRAY LARKALRALK ALVKLQAIVR GRAVRRSVST
201: LLKTKPSNKA SASSLITRTT EGKHWSKIKE ELKVKCNGQN VWDSSALTKE DIKAIWLRKQ EGVVMRERML KYSRSHRERR SPHMLLESLS TPRQRIGVMD
301: TWLDKKDGDK VSLWSSFVSE TSKMSSSKKS SLAHS
101: TLNQATEDQR KHAMNVAIAT AAAAEAAVAA AKAAAEVVRM AGNAFTSQHF VKKRDTNLAA IKIQSAFRAY LARKALRALK ALVKLQAIVR GRAVRRSVST
201: LLKTKPSNKA SASSLITRTT EGKHWSKIKE ELKVKCNGQN VWDSSALTKE DIKAIWLRKQ EGVVMRERML KYSRSHRERR SPHMLLESLS TPRQRIGVMD
301: TWLDKKDGDK VSLWSSFVSE TSKMSSSKKS SLAHS
001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC
Arabidopsis Description
IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.