Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g05980.t01 | Wine grape | cytosol | 70.12 | 65.93 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 46.59 | 48.89 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 46.82 | 48.54 |
| KRH33197 | Soybean | cytosol, mitochondrion | 43.06 | 46.92 |
| CDX70272 | Canola | cytosol, mitochondrion | 32.24 | 46.76 |
| CDY41423 | Canola | cytosol, mitochondrion | 32.0 | 46.42 |
| CDY72577 | Canola | cytosol, mitochondrion | 31.29 | 45.86 |
| Bra009498.1-P | Field mustard | cytosol, mitochondrion | 40.71 | 45.29 |
| Bra028807.1-P | Field mustard | mitochondrion | 39.76 | 44.47 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 40.71 | 42.82 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 42.12 | 42.52 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 46.59 | 42.22 |
| CDY41417 | Canola | mitochondrion | 29.65 | 42.14 |
| CDY14162 | Canola | endoplasmic reticulum | 32.0 | 40.6 |
| CDY04907 | Canola | endoplasmic reticulum | 32.0 | 40.6 |
| PGSC0003DMT400021096 | Potato | nucleus | 20.24 | 38.91 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 31.29 | 29.62 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 27.53 | 29.1 |
| VIT_00s0684g00020.t01 | Wine grape | mitochondrion | 8.71 | 27.01 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 30.12 | 26.89 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 29.88 | 26.46 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 29.41 | 26.26 |
| VIT_11s0016g03030.t01 | Wine grape | cytosol | 26.82 | 26.21 |
| Os03t0355700-00 | Rice | cytosol | 27.06 | 25.5 |
| VIT_05s0020g03980.t01 | Wine grape | cytosol | 27.29 | 25.0 |
| EER94844 | Sorghum | cytosol | 29.18 | 24.85 |
| Zm00001d029197_P001 | Maize | nucleus | 27.76 | 24.79 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 26.82 | 23.08 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 28.94 | 22.12 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 19.29 | 20.97 |
| VIT_16s0100g00620.t01 | Wine grape | cytosol | 16.0 | 20.42 |
| VIT_01s0026g01790.t01 | Wine grape | cytosol | 23.76 | 17.47 |
| VIT_14s0108g00150.t01 | Wine grape | nucleus | 23.29 | 17.13 |
| VIT_17s0000g05840.t01 | Wine grape | endoplasmic reticulum, extracellular | 23.06 | 15.73 |
| VIT_18s0001g13870.t01 | Wine grape | nucleus | 20.0 | 10.73 |
Protein Annotations
| Gene3D:1.20.5.190 | EntrezGene:100253695 | wikigene:100253695 | MapMan:35.2 | EMBL:AM434914 | ProteinID:CAN64892 |
| ProteinID:CAN64892.1 | ProteinID:CBI30059 | ProteinID:CBI30059.3 | ncoils:Coil | UniProt:D7TII3 | InterPro:DUF4005 |
| EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0016787 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | EntrezGene:LOC100253695 | wikigene:LOC100253695 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF41 | SMART:SM00015 | UniParc:UPI0001BE365A | ArrayExpress:VIT_08s0007g05960 |
| EnsemblPlantsGene:VIT_08s0007g05960 | EnsemblPlants:VIT_08s0007g05960.t01 | RefSeq:XP_002274878 | RefSeq:XP_002274878.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:19843662..19845717
Molecular Weight (calculated)
48109.3 Da
IEP (calculated)
10.628
GRAVY (calculated)
-0.726
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKRSWFSL VKRIFISEAK EKEEKKPKSW RCLFTRFKLK QCPTLAAPRR TLTEARAEQR KHALTVALAT AAAAEAAVAA ARAAAEVVRL TCSPPSYYHT
101: CDKRNQNLAA IKIQTAFRGY LARKALQALK GLVRLQALVR GQIVRRQAIT KLKCLPSTAN TRAQVNIGGV LTTEETYKDG NNRKFLRPKK ECGGREIKAY
201: VIEQLEGSGQ RSWDYNILSQ EDVETIWLRK QEALIRRERM KKYSSSHRER INAQMPEETE PYKENGRQSC QLVRWMDSME HKRKEAENSK AAADSNLLNG
301: HINGTTNIEL RNGWKQNSTE GSDMPFSLPR RSFCHRKHNS VIDDSSFPSS PVFPTYMAAT ESAKAKARAL STPKQRLGFL DSCFDQSSPY TNRPSFWSSL
401: NGESISSSGR SGYSWQNTVS MKSLN
101: CDKRNQNLAA IKIQTAFRGY LARKALQALK GLVRLQALVR GQIVRRQAIT KLKCLPSTAN TRAQVNIGGV LTTEETYKDG NNRKFLRPKK ECGGREIKAY
201: VIEQLEGSGQ RSWDYNILSQ EDVETIWLRK QEALIRRERM KKYSSSHRER INAQMPEETE PYKENGRQSC QLVRWMDSME HKRKEAENSK AAADSNLLNG
301: HINGTTNIEL RNGWKQNSTE GSDMPFSLPR RSFCHRKHNS VIDDSSFPSS PVFPTYMAAT ESAKAKARAL STPKQRLGFL DSCFDQSSPY TNRPSFWSSL
401: NGESISSSGR SGYSWQNTVS MKSLN
001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC
Arabidopsis Description
IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.