Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G163000.1 | Wheat | nucleus | 73.39 | 69.54 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 73.39 | 68.96 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 72.51 | 68.7 |
| EER94844 | Sorghum | cytosol | 73.61 | 66.53 |
| Zm00001d029197_P001 | Maize | nucleus | 70.07 | 66.39 |
| Os05t0100008-00 | Rice | cytosol | 22.39 | 63.12 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 74.5 | 60.43 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 45.23 | 45.43 |
| CDY41423 | Canola | cytosol, mitochondrion | 20.18 | 31.06 |
| CDX70272 | Canola | cytosol, mitochondrion | 19.73 | 30.38 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 29.93 | 28.78 |
| Bra028807.1-P | Field mustard | mitochondrion | 24.17 | 28.68 |
| CDY72577 | Canola | cytosol, mitochondrion | 18.4 | 28.62 |
| Bra009498.1-P | Field mustard | cytosol, mitochondrion | 23.73 | 28.01 |
| KRH33197 | Soybean | cytosol, mitochondrion | 23.95 | 27.69 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 24.61 | 27.41 |
| VIT_08s0007g05960.t01 | Wine grape | cytosol | 25.5 | 27.06 |
| KRH23930 | Soybean | nucleus | 27.49 | 26.96 |
| CDY14162 | Canola | endoplasmic reticulum | 19.96 | 26.87 |
| CDY04907 | Canola | endoplasmic reticulum | 19.96 | 26.87 |
| Os05t0187500-01 | Rice | cytosol | 27.72 | 26.6 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 23.73 | 26.49 |
| VIT_08s0007g05980.t01 | Wine grape | cytosol | 26.39 | 26.33 |
| KRH39865 | Soybean | nucleus | 27.27 | 26.23 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 26.83 | 26.02 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 23.5 | 25.85 |
| Os03t0161400-01 | Rice | cytosol, mitochondrion | 22.84 | 25.12 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 25.5 | 25.11 |
| KRH29958 | Soybean | cytosol, mitochondrion | 25.28 | 24.95 |
| KRH63082 | Soybean | cytosol | 24.83 | 24.89 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 25.5 | 24.78 |
| CDY41417 | Canola | mitochondrion | 16.19 | 24.41 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 22.62 | 24.23 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 22.39 | 23.49 |
| CDX85648 | Canola | nucleus | 20.4 | 23.29 |
| Bra023414.1-P | Field mustard | nucleus | 20.4 | 23.29 |
| CDX78523 | Canola | nucleus | 22.62 | 22.87 |
| Os02t0299200-01 | Rice | cytosol, mitochondrion, nucleus | 24.39 | 22.68 |
| CDX70505 | Canola | nucleus | 22.39 | 22.65 |
| Os05t0521900-00 | Rice | cytosol | 18.4 | 22.62 |
| Os03t0636700-00 | Rice | mitochondrion | 22.39 | 22.6 |
| Bra006201.1-P | Field mustard | nucleus | 22.39 | 22.6 |
| Os10t0420200-01 | Rice | mitochondrion | 16.85 | 22.35 |
| AT5G13460.1 | Thale cress | nucleus | 21.29 | 21.67 |
| CDX91120 | Canola | nucleus | 17.96 | 21.6 |
| Os12t0604500-00 | Rice | cytosol | 18.18 | 18.39 |
| PGSC0003DMT400021096 | Potato | nucleus | 8.2 | 16.74 |
| Os05t0535900-01 | Rice | cytosol | 19.73 | 15.51 |
| Os01t0743100-00 | Rice | cytosol, mitochondrion | 13.75 | 14.52 |
| Os01t0716200-01 | Rice | nucleus | 17.52 | 13.76 |
| Os03t0134800-00 | Rice | mitochondrion | 8.65 | 12.87 |
| Os04t0663100-01 | Rice | plasma membrane | 15.74 | 7.95 |
Protein Annotations
| EnsemblPlants:Os03t0355700-00 | EnsemblPlantsGene:Os03g0355700 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF41 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:BAS84234.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0003938C0A |
| UniProt:A0A0P0VXK5 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical conserved gene. (Os03t0355700-00)
Coordinates
chr3:+:13603026..13605298
Molecular Weight (calculated)
48860.0 Da
IEP (calculated)
11.100
GRAVY (calculated)
-0.540
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: FIDQKVKSKR WMFAGKLKTQ HSFALPAPAP AVEEEQIRQA EDEQSKHAMA VALATAAAAE AAVAAAHAAA EVVRLTGKTA ALAPAPATTT TPTPYGHEHA
101: ALMIQSVYRG YLARRALRAL KGLVRLQALI RGQAVRRQTA ATLRGLESLM KIQARQRARA SSAAAAGGDH NAANSPAPDG MDALLRRGRE LYYAAAAAVH
201: EQQLSKGWDS STLSKEEMSA MSRSREEAAL KRVRALQYAS LHQSKVGVRR QPMSREEMET LNQRWSWLEE WVGSQPPFDK DIPVAHQSPS RDAAGAAMND
301: DERPPPPPVL RSRRSFTRAG RRTPARDDDG GGAAAFPGYM ASTASAKAKF RSMSTPKERS GAGAADAYSE QCFPFADRLL SPIPSMSPIP SIASDIVFAR
401: SSRPAAAQRS PRVKGPMTPT RSRSRRSPGR HSFGSEAALH QLQMEQYTPI R
101: ALMIQSVYRG YLARRALRAL KGLVRLQALI RGQAVRRQTA ATLRGLESLM KIQARQRARA SSAAAAGGDH NAANSPAPDG MDALLRRGRE LYYAAAAAVH
201: EQQLSKGWDS STLSKEEMSA MSRSREEAAL KRVRALQYAS LHQSKVGVRR QPMSREEMET LNQRWSWLEE WVGSQPPFDK DIPVAHQSPS RDAAGAAMND
301: DERPPPPPVL RSRRSFTRAG RRTPARDDDG GGAAAFPGYM ASTASAKAKF RSMSTPKERS GAGAADAYSE QCFPFADRLL SPIPSMSPIP SIASDIVFAR
401: SSRPAAAQRS PRVKGPMTPT RSRSRRSPGR HSFGSEAALH QLQMEQYTPI R
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.