Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 87.91 | 82.53 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 50.7 | 46.48 |
| KRH39865 | Soybean | nucleus | 44.19 | 40.51 |
| KRH23930 | Soybean | nucleus | 43.02 | 40.22 |
| Bra023414.1-P | Field mustard | nucleus | 36.05 | 39.24 |
| CDX85648 | Canola | nucleus | 36.05 | 39.24 |
| KRH63082 | Soybean | cytosol | 39.77 | 38.0 |
| KRH29958 | Soybean | cytosol, mitochondrion | 40.23 | 37.86 |
| CDX91120 | Canola | nucleus | 32.56 | 37.33 |
| AT5G13460.1 | Thale cress | nucleus | 38.14 | 37.02 |
| CDX78523 | Canola | nucleus | 37.91 | 36.55 |
| Bra006201.1-P | Field mustard | nucleus | 37.91 | 36.47 |
| CDX70505 | Canola | nucleus | 37.67 | 36.32 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 29.53 | 31.36 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 8.84 | 29.01 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 26.51 | 25.39 |
| PGSC0003DMT400021096 | Potato | nucleus | 12.79 | 24.89 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 26.05 | 23.33 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 25.81 | 23.32 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 25.81 | 23.32 |
| Os03t0355700-00 | Rice | cytosol | 23.49 | 22.39 |
| EER94844 | Sorghum | cytosol | 24.65 | 21.24 |
| Zm00001d029197_P001 | Maize | nucleus | 23.49 | 21.22 |
| PGSC0003DMT400014796 | Potato | cytosol | 17.44 | 20.83 |
| PGSC0003DMT400000953 | Potato | cytosol | 16.98 | 20.05 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 24.42 | 18.88 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 20.23 | 17.4 |
| PGSC0003DMT400037043 | Potato | mitochondrion, nucleus | 19.07 | 17.23 |
| PGSC0003DMT400042595 | Potato | nucleus | 5.81 | 16.45 |
| PGSC0003DMT400003322 | Potato | cytosol | 19.07 | 14.7 |
| PGSC0003DMT400016500 | Potato | nucleus | 7.91 | 12.78 |
| PGSC0003DMT400045444 | Potato | cytosol, plastid | 16.51 | 12.77 |
| PGSC0003DMT400009545 | Potato | nucleus | 18.14 | 8.99 |
Protein Annotations
| EntrezGene:102604603 | MapMan:35.2 | InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| UniProt:M1A954 | PFAM:PF00612 | PFAM:PF13178 | EnsemblPlantsGene:PGSC0003DMG400006824 | PGSC:PGSC0003DMG400006824 | EnsemblPlants:PGSC0003DMT400017589 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF35 | UniParc:UPI000294E356 | RefSeq:XP_006345487.1 | SEG:seg |
Description
IQ-domain 11 [Source:PGSC_GENE;Acc:PGSC0003DMG400006824]
Coordinates
chr1:-:64509716..64512328
Molecular Weight (calculated)
49967.8 Da
IEP (calculated)
10.676
GRAVY (calculated)
-0.783
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKKSWFNL LKTFFVSGSE SRLDKGKRKG WVFTRLKIRR LVATSALSPP RERRHQKAEE KHNKHAIKVD VETINESNAD AETPIVEAEI ATFKEGTESI
101: CHRPKNETLV LSKMTIHGQE TKYFYLYERR IENLAAIKIQ TAFRSYLARK ALRALKGLVR LQAIVRGRAV RRQAIATLRS LQSIVNIQSE VCAKRCDNQV
201: KTTVHCQENT LLDLGEKDIK IDLNSQKRWD NRYLSKEEAN KMFSSKREAA IKRERIREYW LSHRRSTESD VNGRRRYWLE QWVDAQLAKR DDLKNVDTLF
301: SARNREEFER KEMKPKSSLR QYHTDQELVS PVYVPRRSFH HRRQKSSGDH DNTFMGSPSI PTYMAATESA KAKARSMSSP RLRPINTDVY SEINSPLQVQ
401: TISPYLLSTA MPRSQVGLEV FLASHKDHHA
101: CHRPKNETLV LSKMTIHGQE TKYFYLYERR IENLAAIKIQ TAFRSYLARK ALRALKGLVR LQAIVRGRAV RRQAIATLRS LQSIVNIQSE VCAKRCDNQV
201: KTTVHCQENT LLDLGEKDIK IDLNSQKRWD NRYLSKEEAN KMFSSKREAA IKRERIREYW LSHRRSTESD VNGRRRYWLE QWVDAQLAKR DDLKNVDTLF
301: SARNREEFER KEMKPKSSLR QYHTDQELVS PVYVPRRSFH HRRQKSSGDH DNTFMGSPSI PTYMAATESA KAKARSMSSP RLRPINTDVY SEINSPLQVQ
401: TISPYLLSTA MPRSQVGLEV FLASHKDHHA
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.