CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63082	Soybean	cytosol	88.84	90.22
KRH23930	Soybean	nucleus	71.99	71.52
KRH39865	Soybean	nucleus	72.43	70.58
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	54.49	53.09
Bra023414.1-P	Field mustard	nucleus	38.73	44.81
CDX85648	Canola	nucleus	38.73	44.81
AT5G13460.1	Thale cress	nucleus	42.67	44.02
CDX78523	Canola	nucleus	42.23	43.27
Bra006201.1-P	Field mustard	nucleus	41.79	42.73
CDX70505	Canola	nucleus	41.14	42.15
CDX91120	Canola	nucleus	34.57	42.13
Solyc01g088250.2.1	Tomato	cytosol, plastid	40.7	40.61
PGSC0003DMT400017589	Potato	cytosol, plastid	37.86	40.23
KRH33197	Soybean	cytosol, mitochondrion	30.63	35.9
KRH48993	Soybean	plastid	5.91	28.72
GSMUA_Achr3P17450_001	Banana	nucleus	27.13	27.62
KRH47199	Soybean	cytosol	23.19	26.77
TraesCS5A01G163000.1	Wheat	nucleus	27.79	26.68
KRH60203	Soybean	cytosol, mitochondrion	21.01	26.67
TraesCS5B01G160400.1	Wheat	cytosol	27.57	26.47
TraesCS5D01G168000.2	Wheat	nucleus	27.79	26.46
KRH41488	Soybean	cytosol, mitochondrion	25.16	26.38
KRH44268	Soybean	cytosol	23.19	26.37
KRH74242	Soybean	cytosol, mitochondrion	23.63	25.71
EER94844	Sorghum	cytosol	27.79	25.45
Os03t0355700-00	Rice	cytosol	24.95	25.28
KRH48992	Soybean	endoplasmic reticulum	18.6	25.15
Zm00001d029197_P001	Maize	nucleus	26.04	25.0
KRG91354	Soybean	cytosol, plastid	25.16	24.57
KRH35475	Soybean	cytosol	25.16	24.52
KRH07958	Soybean	mitochondrion	7.44	24.11
KRH69109	Soybean	nucleus	20.57	22.54
KRH03972	Soybean	cytosol	21.66	22.15
KRH57246	Soybean	cytosol	21.44	22.02
KRH09113	Soybean	cytosol	22.76	21.8
KRH31669	Soybean	cytosol, mitochondrion	20.13	21.75
HORVU5Hr1G050840.5	Barley	cytosol, plastid	26.26	21.58
KRG91452	Soybean	cytosol	21.44	21.49
KRH38565	Soybean	cytosol	22.54	21.37
KRH35361	Soybean	cytosol, mitochondrion	21.66	21.34
KRH09951	Soybean	cytosol	17.51	21.16
KRH23382	Soybean	cytosol	17.51	21.05
KRH77498	Soybean	cytosol, mitochondrion	17.07	19.7
KRH68719	Soybean	cytosol	14.66	17.91
KRG96957	Soybean	cytosol	14.44	17.84
KRH54515	Soybean	cytosol	20.79	16.27
KRH63392	Soybean	cytosol	20.13	15.78
KRH56937	Soybean	cytosol	19.69	15.36
KRG99144	Soybean	cytosol, plastid	17.94	14.99
KRH03447	Soybean	nucleus	19.26	14.97
KRH45861	Soybean	plastid	17.72	14.81
KRH74806	Soybean	cytosol, plastid	16.19	13.14
KRH69321	Soybean	cytosol, mitochondrion	15.32	12.43
KRH51729	Soybean	cytosol	20.35	10.95
KRH61064	Soybean	nucleus	11.16	7.02

Protein Annotations

EMBL:ACUP02006837	EnsemblPlants:KRH29958	EnsemblPlantsGene:GLYMA_11G149200	EntrezGene:100777067	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF35	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH29958	ProteinID:KRH29958.1
SEG:seg	SMART:SM00015	UniParc:UPI000233D001	UniProt:I1LL80	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr11:-:11611414..11614759

Molecular Weight (calculated)

51665.6 Da

IEP (calculated)

10.683

GRAVY (calculated)

-0.753

Length

457 amino acids

Sequence
(BLAST)

001: MVKKGWFSMF KKLFLWNTHS SQEKKEKRRR AWIFGRVKTK RLPSITAPPP PPSKETRLSE AEEEHSKHAL TVAIASAAAA EAAITAAQVA VEVVRLQSAA
101: HLQLKEKQEQ LQLQPVKTSH DAPQNTHQRQ RKIQESSAIK IQTAYRGYLA RKALRALKGI VKLQAIIRGR AVRRQALSTL KCLESIVSIQ SQVFARKSQM
201: VEERWDCGEH EEMQGSRDKI IRMDSNSERT WDDSILLKEE VDASCVSKKE AVLKREKVKE YSFNHRRSAE SERNKINGRW RYWMEQWVDT QLSKSKELED
301: LDSVFSSHYS RPGEECGRRQ LKLRNFQRQN QIEALDSPSL SSRNQTSGAE DHSVPSSPAI PTYMAATKST QAKARSTSSP RARIGGNFDI NSDSYSPCKN
401: KLPIVTSING EVLSNGRIGK LSSNQQRSPS LKGLPRPLKL SQTLRGLSIN SDCPVPI

Best Arabidopsis Sequence Match ( AT5G13460.1 )
(BLAST)

001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR

Arabidopsis Description

IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.