CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012855.1-P	Field mustard	mitochondrion	43.26	59.22
CDX90650	Canola	mitochondrion	43.26	59.22
AT3G51380.1	Thale cress	mitochondrion	43.26	59.22
CDY29016	Canola	mitochondrion	42.55	58.25
VIT_00s0684g00020.t01	Wine grape	mitochondrion	55.32	56.93
PGSC0003DMT400009431	Potato	mitochondrion	45.39	48.85
CDX73724	Canola	mitochondrion	41.13	44.62
GSMUA_Achr1P02670_001	Banana	mitochondrion	41.13	40.56
CDX78003	Canola	mitochondrion	43.26	40.13
Bra036812.1-P	Field mustard	mitochondrion	43.26	39.61
GSMUA_Achr11P...	Banana	mitochondrion	42.55	30.15
Zm00001d048352_P001	Maize	mitochondrion	37.59	19.27
OQU93295	Sorghum	plastid	34.75	17.31
KRH48992	Soybean	endoplasmic reticulum	31.21	13.02
TraesCS5A01G502100.1	Wheat	cytosol, plastid	34.04	12.5
HORVU4Hr1G081190.1	Barley	mitochondrion	34.04	12.34
KRH47199	Soybean	cytosol	33.33	11.87
TraesCS4B01G330700.1	Wheat	mitochondrion	33.33	11.87
TraesCS4D01G327500.1	Wheat	mitochondrion	33.33	11.84
KRH60203	Soybean	cytosol, mitochondrion	29.79	11.67
KRH44268	Soybean	cytosol	32.62	11.44
KRH69109	Soybean	nucleus	33.33	11.27
KRH68719	Soybean	cytosol	29.79	11.23
KRG96957	Soybean	cytosol	29.08	11.08
KRH31669	Soybean	cytosol, mitochondrion	32.62	10.87
KRG91452	Soybean	cytosol	34.75	10.75
KRH35361	Soybean	cytosol, mitochondrion	34.75	10.56
KRH09113	Soybean	cytosol	34.75	10.27
KRH74242	Soybean	cytosol, mitochondrion	30.5	10.24
KRH38565	Soybean	cytosol	34.75	10.17
KRH77498	Soybean	cytosol, mitochondrion	28.37	10.1
KRH35475	Soybean	cytosol	32.62	9.81
KRH41488	Soybean	cytosol, mitochondrion	29.79	9.63
KRG91354	Soybean	cytosol, plastid	31.91	9.62
KRH09951	Soybean	cytosol	25.53	9.52
KRH23382	Soybean	cytosol	24.82	9.21
KRH03972	Soybean	cytosol	27.66	8.72
KRH33197	Soybean	cytosol, mitochondrion	24.11	8.72
KRH57246	Soybean	cytosol	26.24	8.31
KRH23930	Soybean	nucleus	26.24	8.04
KRH63082	Soybean	cytosol	24.82	7.78
KRH39865	Soybean	nucleus	25.53	7.68
KRH29958	Soybean	cytosol, mitochondrion	24.11	7.44
KRH63392	Soybean	cytosol	27.66	6.69
KRH54515	Soybean	cytosol	26.24	6.34
KRH56937	Soybean	cytosol	24.82	5.97
KRH03447	Soybean	nucleus	24.82	5.95
KRG99144	Soybean	cytosol, plastid	22.7	5.85
KRH45861	Soybean	plastid	21.28	5.48
KRH74806	Soybean	cytosol, plastid	19.86	4.97
KRH51729	Soybean	cytosol	28.37	4.71
KRH69321	Soybean	cytosol, mitochondrion	18.44	4.62
KRH61064	Soybean	nucleus	6.38	1.24
Os05t0100008-00	Rice	cytosol	0.0	0.0
KRH48993	Soybean	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02010128	EnsemblPlants:KRH07958	EnsemblPlantsGene:GLYMA_16G121000	EntrezGene:100788207	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF86	PFAM:PF00612	PFscan:PS50096	ProteinID:KRH07958	ProteinID:KRH07958.1	SEG:seg
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000233EEF2	UniProt:K7MGU8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr16:+:26909514..26910355

Molecular Weight (calculated)

16300.1 Da

IEP (calculated)

11.660

GRAVY (calculated)

-0.290

Length

141 amino acids

Sequence
(BLAST)

001: MGVPQKWFRN IVRGRFLRSS NKDIVLVLPR TSICTNECEE AMLRNEEFSF PTPISSITKE DASAIKIQAY FRGHLARRAY KALKSLVKLQ ALVRGVWVRK
101: QSRIAMQCMH ALVRLQVRVR ARQLLGSFDK ERPTNLQSQN V

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.