CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48993	Soybean	plastid	20.71	92.55
KRH60203	Soybean	cytosol, mitochondrion	62.62	73.06
KRH48992	Soybean	endoplasmic reticulum	56.67	70.41
KRH41488	Soybean	cytosol, mitochondrion	72.14	69.5
VIT_11s0016g03030.t01	Wine grape	cytosol	68.1	65.75
KRH47199	Soybean	cytosol	54.76	58.08
Solyc12g008520.1.1	Tomato	cytosol	55.48	56.97
KRH44268	Soybean	cytosol	53.81	56.22
PGSC0003DMT400000953	Potato	cytosol	44.52	51.37
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	47.38	49.01
GSMUA_Achr10P...	Banana	cytosol	51.19	48.75
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	42.14	47.97
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	42.62	47.73
TraesCS1B01G142100.1	Wheat	cytosol	51.43	47.58
TraesCS1D01G123800.1	Wheat	cytosol	51.43	47.58
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	45.71	47.52
TraesCS1A01G122900.1	Wheat	cytosol, plastid	51.19	47.36
Bra024161.1-P	Field mustard	mitochondrion	43.1	46.65
CDY30233	Canola	mitochondrion	43.1	46.65
AT4G29150.1	Thale cress	mitochondrion	44.29	46.62
Os01t0190500-01	Rice	cytosol, mitochondrion	51.43	46.45
GSMUA_AchrUn_...	Banana	cytosol	41.9	46.44
Os05t0187500-01	Rice	cytosol	51.67	46.17
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	41.43	46.15
CDY47784	Canola	mitochondrion	42.62	46.13
Zm00001d037688_P001	Maize	mitochondrion	49.76	45.24
Zm00001d010366_P001	Maize	cytosol, mitochondrion	49.29	44.14
TraesCS3B01G127100.1	Wheat	cytosol	48.57	44.06
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	48.33	44.03
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	48.1	43.25
KXG21487	Sorghum	cytosol, mitochondrion	49.52	42.19
KRH09951	Soybean	cytosol	37.38	41.53
EES02320	Sorghum	mitochondrion	47.38	41.46
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	39.29	41.25
KRH23382	Soybean	cytosol	37.14	41.05
HORVU1Hr1G028250.6	Barley	mitochondrion	50.71	40.42
Zm00001d039510_P001	Maize	cytosol, mitochondrion	45.48	39.71
Zm00001d008819_P001	Maize	mitochondrion	43.33	39.06
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	48.57	35.6
KRG91354	Soybean	cytosol, plastid	34.29	30.77
KRH07958	Soybean	mitochondrion	10.24	30.5
KRH35475	Soybean	cytosol	33.57	30.06
KRH03972	Soybean	cytosol	31.43	29.53
KRH57246	Soybean	cytosol	30.95	29.21
KRH77498	Soybean	cytosol, mitochondrion	26.43	28.03
KRH31669	Soybean	cytosol, mitochondrion	28.1	27.9
KRH69109	Soybean	nucleus	27.62	27.82
KRH09113	Soybean	cytosol	30.48	26.83
KRG91452	Soybean	cytosol	28.81	26.54
KRH38565	Soybean	cytosol	30.24	26.35
KRH35361	Soybean	cytosol, mitochondrion	28.57	25.86
KRH23930	Soybean	nucleus	27.14	24.78
KRH39865	Soybean	nucleus	26.9	24.09
KRH29958	Soybean	cytosol, mitochondrion	25.71	23.63
KRH63082	Soybean	cytosol	24.29	22.67
KRH33197	Soybean	cytosol, mitochondrion	20.95	22.56
KRG96957	Soybean	cytosol	18.57	21.08
KRH68719	Soybean	cytosol	18.33	20.59
KRH54515	Soybean	cytosol	20.48	14.73
KRH63392	Soybean	cytosol	20.0	14.41
KRG99144	Soybean	cytosol, plastid	18.33	14.08
KRH56937	Soybean	cytosol	19.52	13.99
KRH03447	Soybean	nucleus	19.52	13.95
KRH45861	Soybean	plastid	17.86	13.71
KRH74806	Soybean	cytosol, plastid	17.38	12.97
KRH69321	Soybean	cytosol, mitochondrion	16.67	12.43
KRH51729	Soybean	cytosol	20.48	10.13
KRH61064	Soybean	nucleus	11.9	6.88

Protein Annotations

EMBL:ACUP02000010	EnsemblPlants:KRH74242	EnsemblPlantsGene:GLYMA_01G007000	EntrezGene:100797909	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF22	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH74242	ProteinID:KRH74242.1
SEG:seg	SMART:SM00015	UniParc:UPI0002336CB1	UniProt:I1J4H8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:681991..683516

Molecular Weight (calculated)

46610.0 Da

IEP (calculated)

10.921

GRAVY (calculated)

-0.482

Length

420 amino acids

Sequence
(BLAST)

001: MGRATRWVKS LFGIRREKEK KLNFRCGEAK SMELCCSEST SNSTVLCHNS GTIPPNLSQA EAAWLQSFCT EKEQNKHAIA VAAATAAAAD AAVAAAQAAV
101: AVVRLTSQGR GRTMFGVGPE MWAAIKIQTV FRGFLARKAL RALKGLVKLQ ALVRGYLVRK LATATLHSMQ ALVRAQARMR SHKSLRPMTT KNEAYKPHNR
201: ARRSMERFDD TKSECAVPIH SRRVSSSFDA TINNSVDGSP KIVEVDTFRP KSRSRRAISD FGDEPSLEAL SSPLPVPYRT PTRLSIPDQR NIQDSEWGLT
301: GEECRFSTAH STPRFTNSCT CGSVAPLTPK SVCTDNYLFL RQYGNFPNYM TSTQSFKAKL RSHSAPKQRP EPGPRKRISL NEMMESRNSL SGVRMQRSCS
401: QVQEVINFKN VVMGKLQKST

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.