CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03972	Soybean	cytosol	61.11	54.14
KRH57246	Soybean	cytosol	59.34	52.81
VIT_02s0025g04120.t01	Wine grape	mitochondrion	59.09	47.37
Solyc08g007920.1.1	Tomato	cytosol	26.77	45.3
Solyc08g007930.1.1	Tomato	cytosol	25.76	44.93
CDX98787	Canola	mitochondrion	31.57	42.23
PGSC0003DMT400014796	Potato	cytosol	38.38	42.22
PGSC0003DMT400007855	Potato	cytosol, plastid	53.03	42.0
Solyc08g080470.2.1	Tomato	plastid	52.78	41.88
GSMUA_Achr8P11920_001	Banana	cytosol	36.62	40.39
HORVU0Hr1G005320.2	Barley	cytosol	36.36	39.56
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	43.94	37.91
EES12687	Sorghum	cytosol, mitochondrion	44.44	37.69
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	43.18	37.17
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	43.18	37.01
Zm00001d002630_P002	Maize	mitochondrion	42.42	36.76
Os04t0569900-01	Rice	cytosol, mitochondrion	42.93	36.64
KRH48993	Soybean	plastid	8.59	36.17
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	38.89	35.9
CDY41368	Canola	mitochondrion, plastid	37.63	35.48
CDY41252	Canola	cytosol, mitochondrion	43.43	35.25
CDX76341	Canola	mitochondrion, plastid	37.37	35.24
Bra020822.1-P	Field mustard	mitochondrion, plastid	37.37	35.24
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	37.63	35.22
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	38.89	35.16
Bra019337.1-P	Field mustard	nucleus	41.67	35.03
CDY53133	Canola	nucleus	42.68	34.77
CDX98786	Canola	nucleus	41.67	34.74
Zm00001d026084_P001	Maize	mitochondrion	43.43	34.68
Bra013672.1-P	Field mustard	mitochondrion, nucleus	43.43	34.68
AT4G23060.1	Thale cress	mitochondrion, nucleus	42.17	34.5
CDX94150	Canola	nucleus	39.65	33.84
KRG91452	Soybean	cytosol	36.87	32.02
KRH09113	Soybean	cytosol	37.88	31.45
KRH35361	Soybean	cytosol, mitochondrion	36.11	30.82
KRH38565	Soybean	cytosol	36.87	30.29
KRH09951	Soybean	cytosol	28.28	29.63
KRH47199	Soybean	cytosol	29.04	29.04
KRH23382	Soybean	cytosol	27.53	28.68
KRH07958	Soybean	mitochondrion	10.1	28.37
KRH44268	Soybean	cytosol	28.03	27.61
KRH74242	Soybean	cytosol, mitochondrion	28.03	26.43
KRH60203	Soybean	cytosol, mitochondrion	23.99	26.39
KRH41488	Soybean	cytosol, mitochondrion	27.78	25.23
KRG91354	Soybean	cytosol, plastid	29.04	24.57
KRH35475	Soybean	cytosol	29.04	24.52
KRH31669	Soybean	cytosol, mitochondrion	26.01	24.35
KRH69109	Soybean	nucleus	25.51	24.22
KRH68719	Soybean	cytosol	22.22	23.53
KRH48992	Soybean	endoplasmic reticulum	19.7	23.08
KRG96957	Soybean	cytosol	21.21	22.7
KRH23930	Soybean	nucleus	23.48	20.22
KRH39865	Soybean	nucleus	23.48	19.83
KRH33197	Soybean	cytosol, mitochondrion	19.19	19.49
KRH29958	Soybean	cytosol, mitochondrion	19.7	17.07
KRG99144	Soybean	cytosol, plastid	22.98	16.64
KRH63082	Soybean	cytosol	18.43	16.22
KRH63392	Soybean	cytosol	23.48	15.95
KRH54515	Soybean	cytosol	23.23	15.75
KRH45861	Soybean	plastid	21.72	15.72
KRH56937	Soybean	cytosol	22.73	15.36
KRH03447	Soybean	nucleus	22.73	15.31
KRH69321	Soybean	cytosol, mitochondrion	18.18	12.79
KRH74806	Soybean	cytosol, plastid	17.93	12.61
KRH51729	Soybean	cytosol	23.99	11.19
KRH61064	Soybean	nucleus	13.38	7.29

Protein Annotations

EMBL:ACUP02000673	EnsemblPlants:KRH77498	EnsemblPlantsGene:GLYMA_01G217200	EntrezGene:100814244	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF13	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH77498	ProteinID:KRH77498.1
SEG:seg	SMART:SM00015	UniParc:UPI0002336B71	UniProt:I1JA45	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:+:54751596..54755064

Molecular Weight (calculated)

44420.6 Da

IEP (calculated)

10.946

GRAVY (calculated)

-0.819

Length

396 amino acids

Sequence
(BLAST)

001: MGKASKWFRG LLGLKRPDSP SPKEKRRWTF VKSYREKDPT RIVAATPRRC PATTAGGNTP EEWAAVKIQA AFRGSLARKA LRALKGLVKL QALVRGHIER
101: KRTAEWLQRV QALLRVQAQI RAGRAQILHS PSSTSHLRGP ATPDKFEIPI RSESMKYDQY SSPLLKRNSS KSRVQINGGN QERCRSRSSD SRIDEQPWTQ
201: RRSWTRGCSM DEERSVRILE IDSVKPHVTS KRRNLFYSPS QAMVVSDHYS GCNLTTTSPS SYNSPLKINE LEESSFCAAD NSPQALSLSS SSKDGASKRS
301: PLTPTRSDGS RSFLSGYSEP NYPSYMAYTE SSKAKLRSLS APKQRPQYER CSSSNRYSLH GLATQRIAAL HASFTNKAYP GSGRLDKLGM HVPYKY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.