Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41252 | Canola | cytosol, mitochondrion | 96.91 | 96.52 |
| Bra013672.1-P | Field mustard | mitochondrion, nucleus | 95.06 | 93.15 |
| CDX98787 | Canola | mitochondrion | 50.82 | 83.45 |
| CDX98786 | Canola | nucleus | 79.01 | 80.84 |
| CDY41368 | Canola | mitochondrion, plastid | 69.14 | 80.0 |
| CDX94150 | Canola | nucleus | 75.1 | 78.66 |
| CDX76341 | Canola | mitochondrion, plastid | 67.28 | 77.86 |
| GSMUA_Achr8P11920_001 | Banana | cytosol | 34.77 | 47.08 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 46.09 | 45.34 |
| KRH03972 | Soybean | cytosol | 41.56 | 45.19 |
| CDX90650 | Canola | mitochondrion | 9.47 | 44.66 |
| KRH57246 | Soybean | cytosol | 40.33 | 44.04 |
| CDY29016 | Canola | mitochondrion | 9.26 | 43.69 |
| KRH77498 | Soybean | cytosol, mitochondrion | 34.77 | 42.68 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 40.53 | 42.46 |
| EES12687 | Sorghum | cytosol, mitochondrion | 40.53 | 42.18 |
| Zm00001d002630_P002 | Maize | mitochondrion | 39.3 | 41.79 |
| CDX75112 | Canola | cytosol | 11.93 | 41.73 |
| GSMUA_Achr5P20090_001 | Banana | cytosol, mitochondrion | 39.3 | 41.61 |
| Solyc08g007920.1.1 | Tomato | cytosol | 19.96 | 41.45 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 39.09 | 41.3 |
| CDX98994 | Canola | mitochondrion | 29.84 | 40.96 |
| CDX70019 | Canola | cytosol, mitochondrion | 29.84 | 40.96 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 38.89 | 40.91 |
| Solyc08g080470.2.1 | Tomato | plastid | 41.98 | 40.88 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 41.56 | 40.4 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 35.6 | 40.33 |
| Solyc08g007930.1.1 | Tomato | cytosol | 18.72 | 40.09 |
| CDX78285 | Canola | plastid | 28.19 | 39.83 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 35.8 | 39.73 |
| Zm00001d026084_P001 | Maize | mitochondrion | 39.71 | 38.91 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 29.01 | 38.74 |
| PGSC0003DMT400014796 | Potato | cytosol | 28.19 | 38.06 |
| CDX73724 | Canola | mitochondrion | 9.88 | 36.92 |
| CDY00253 | Canola | plastid | 29.84 | 36.8 |
| CDX86928 | Canola | mitochondrion, plastid | 29.84 | 36.8 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 31.69 | 36.41 |
| CDX81042 | Canola | plastid | 28.6 | 35.92 |
| CDY00251 | Canola | plastid | 30.04 | 35.52 |
| CDY43103 | Canola | cytosol | 26.34 | 34.78 |
| CDY29768 | Canola | cytosol | 11.93 | 34.73 |
| CDX92076 | Canola | cytosol | 27.16 | 34.11 |
| CDX75883 | Canola | cytosol | 25.72 | 33.33 |
| CDX78003 | Canola | mitochondrion | 10.29 | 32.89 |
| CDY67178 | Canola | cytosol, mitochondrion | 26.13 | 32.73 |
| CDX82400 | Canola | cytosol | 25.1 | 32.71 |
| CDY68636 | Canola | cytosol | 25.93 | 32.39 |
| CDY46537 | Canola | cytosol, mitochondrion | 18.72 | 31.38 |
| CDY53440 | Canola | mitochondrion | 18.31 | 30.69 |
| CDY45643 | Canola | cytosol | 20.37 | 30.37 |
| CDY30233 | Canola | mitochondrion | 23.66 | 29.64 |
| CDY47784 | Canola | mitochondrion | 23.46 | 29.38 |
| CDY50677 | Canola | nucleus | 21.81 | 28.8 |
| CDY36861 | Canola | nucleus | 21.6 | 28.07 |
| CDY41423 | Canola | cytosol, mitochondrion | 16.67 | 27.65 |
| CDX70272 | Canola | cytosol, mitochondrion | 16.46 | 27.3 |
| CDY72577 | Canola | cytosol, mitochondrion | 16.05 | 26.9 |
| CDY64325 | Canola | cytosol | 20.37 | 26.54 |
| CDY14162 | Canola | endoplasmic reticulum | 16.87 | 24.48 |
| CDY04907 | Canola | endoplasmic reticulum | 16.87 | 24.48 |
| CDY41417 | Canola | mitochondrion | 13.79 | 22.41 |
| CDX85648 | Canola | nucleus | 16.05 | 19.75 |
| CDX91120 | Canola | nucleus | 15.02 | 19.47 |
| CDX70505 | Canola | nucleus | 16.26 | 17.71 |
| CDX78523 | Canola | nucleus | 16.05 | 17.49 |
| CDX83805 | Canola | cytosol, mitochondrion | 16.67 | 14.52 |
| CDY19251 | Canola | cytosol, mitochondrion | 16.46 | 14.29 |
| CDY26720 | Canola | cytosol, mitochondrion | 16.46 | 14.18 |
| CDY41676 | Canola | cytosol, plastid | 16.05 | 13.57 |
| CDY67405 | Canola | cytosol | 15.84 | 13.3 |
| CDY04138 | Canola | cytosol, plastid | 14.2 | 12.3 |
| CDY04137 | Canola | cytosol, plastid | 14.2 | 12.26 |
| CDY45197 | Canola | nucleus, plastid | 14.61 | 12.18 |
| CDX96693 | Canola | nucleus | 16.67 | 12.04 |
| CDY17427 | Canola | cytosol, plastid | 13.99 | 11.99 |
| CDY03037 | Canola | cytosol | 14.2 | 11.94 |
| CDY49085 | Canola | cytosol | 14.4 | 11.42 |
| CDY39317 | Canola | cytosol | 13.58 | 10.87 |
| CDX83739 | Canola | nucleus | 15.84 | 10.42 |
| CDY62588 | Canola | nucleus | 15.23 | 9.99 |
| CDY29389 | Canola | nucleus, plastid | 15.02 | 9.76 |
| CDY44186 | Canola | nucleus, plastid | 14.61 | 9.71 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | UniProt:A0A078IW07 | EnsemblPlants:CDY53133 | ProteinID:CDY53133 | ProteinID:CDY53133.1 |
| InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00008665001 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF13 |
| SMART:SM00015 | UniParc:UPI0004EE99BE | SEG:seg | : | : | : |
Description
BnaC01g41430DBnaC01g41430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW07]
Coordinates
chrLK033169:+:43078..46352
Molecular Weight (calculated)
53229.4 Da
IEP (calculated)
10.620
GRAVY (calculated)
-0.701
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKASRWFRN LFGLKNTEPG YPDPSLETPS RSYTKRRWSF VKSKREKGTA TPNQHPPPPS SLPNSTPPPS SYYPKSSPSP RKQKPVWEDE GDDDSAKHAI
101: AVAAATAAVA KAAVTAANAA AAVVRLTSKS GRIMRSPVTA NFSNGFEDVP AYVSKFDGHG SGRGVCEDLA AIKIQSAFRG YLARRALRAL KGLVRLQAIV
201: RGHIERKRMS VHLRRMHALV RAQACVRASR VTVTSESSSS QSNNTKSSHF QNPGPPTPEK LEHSISSRSS KLGHSHIFKK NGSKANNNRP YAGAHREVFS
301: AMNEEEKILE IDRKHNSSYT RRSRPDMFYS SHLVLDNSGR SGPVYSMPFS PSSSHEETVN QFFTAENSPQ LYSATSVSKR SAFTASSIAP SDCTKSCCYA
401: DHPSYMACTE SSRAKARSVS APKSRPQLFY EQSSSKRFGF VDVPYCGGDT KSGPQKGSAL HASFMNKAYP GSGRLDRLGM PISYRY
101: AVAAATAAVA KAAVTAANAA AAVVRLTSKS GRIMRSPVTA NFSNGFEDVP AYVSKFDGHG SGRGVCEDLA AIKIQSAFRG YLARRALRAL KGLVRLQAIV
201: RGHIERKRMS VHLRRMHALV RAQACVRASR VTVTSESSSS QSNNTKSSHF QNPGPPTPEK LEHSISSRSS KLGHSHIFKK NGSKANNNRP YAGAHREVFS
301: AMNEEEKILE IDRKHNSSYT RRSRPDMFYS SHLVLDNSGR SGPVYSMPFS PSSSHEETVN QFFTAENSPQ LYSATSVSKR SAFTASSIAP SDCTKSCCYA
401: DHPSYMACTE SSRAKARSVS APKSRPQLFY EQSSSKRFGF VDVPYCGGDT KSGPQKGSAL HASFMNKAYP GSGRLDRLGM PISYRY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.