Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98994 | Canola | mitochondrion | 98.02 | 98.02 |
| Bra009281.1-P | Field mustard | mitochondrion | 97.46 | 97.46 |
| CDX78285 | Canola | plastid | 80.51 | 82.85 |
| CDX81042 | Canola | plastid | 81.92 | 74.94 |
| AT5G07240.2 | Thale cress | plastid | 81.36 | 64.43 |
| CDY00253 | Canola | plastid | 67.23 | 60.41 |
| CDX86928 | Canola | mitochondrion, plastid | 66.95 | 60.15 |
| CDY00251 | Canola | plastid | 66.95 | 57.66 |
| CDX90650 | Canola | mitochondrion | 12.99 | 44.66 |
| CDY29016 | Canola | mitochondrion | 12.71 | 43.69 |
| KRH09113 | Soybean | cytosol | 53.11 | 39.41 |
| KRH38565 | Soybean | cytosol | 53.11 | 39.0 |
| KRG91452 | Soybean | cytosol | 50.0 | 38.82 |
| KRH35361 | Soybean | cytosol, mitochondrion | 50.28 | 38.36 |
| GSMUA_Achr8P11920_001 | Banana | cytosol | 37.85 | 37.33 |
| CDX73724 | Canola | mitochondrion | 12.43 | 33.85 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 40.68 | 33.57 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 41.53 | 33.56 |
| VIT_16s0100g00620.t01 | Wine grape | cytosol | 30.79 | 32.73 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 44.92 | 32.72 |
| GSMUA_Achr5P20090_001 | Banana | cytosol, mitochondrion | 41.81 | 32.24 |
| CDY46537 | Canola | cytosol, mitochondrion | 25.99 | 31.72 |
| PGSC0003DMT400037043 | Potato | mitochondrion, nucleus | 42.66 | 31.72 |
| EES12687 | Sorghum | cytosol, mitochondrion | 41.53 | 31.48 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 41.24 | 31.47 |
| CDY53440 | Canola | mitochondrion | 25.71 | 31.38 |
| Zm00001d002630_P002 | Maize | mitochondrion | 40.11 | 31.07 |
| CDX78003 | Canola | mitochondrion | 13.28 | 30.92 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 40.11 | 30.87 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 40.11 | 30.74 |
| CDY43103 | Canola | cytosol | 31.92 | 30.71 |
| CDY41252 | Canola | cytosol, mitochondrion | 41.53 | 30.12 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 35.88 | 30.02 |
| CDY53133 | Canola | nucleus | 40.96 | 29.84 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 30.51 | 29.67 |
| CDY29768 | Canola | cytosol | 13.84 | 29.34 |
| Zm00001d026084_P001 | Maize | mitochondrion | 40.96 | 29.23 |
| CDX92076 | Canola | cytosol | 31.36 | 28.68 |
| CDY41368 | Canola | mitochondrion, plastid | 33.9 | 28.57 |
| CDX82400 | Canola | cytosol | 29.94 | 28.42 |
| CDX75883 | Canola | cytosol | 29.94 | 28.27 |
| CDY45643 | Canola | cytosol | 25.99 | 28.22 |
| CDY68636 | Canola | cytosol | 30.79 | 28.02 |
| CDX94150 | Canola | nucleus | 36.72 | 28.02 |
| CDY67178 | Canola | cytosol, mitochondrion | 30.23 | 27.58 |
| CDX76341 | Canola | mitochondrion, plastid | 32.49 | 27.38 |
| CDX98786 | Canola | nucleus | 36.44 | 27.16 |
| CDY47784 | Canola | mitochondrion | 29.66 | 27.06 |
| CDY30233 | Canola | mitochondrion | 29.1 | 26.55 |
| CDX70272 | Canola | cytosol, mitochondrion | 20.9 | 25.26 |
| CDY72577 | Canola | cytosol, mitochondrion | 20.62 | 25.17 |
| CDY41423 | Canola | cytosol, mitochondrion | 20.62 | 24.91 |
| CDX98787 | Canola | mitochondrion | 20.62 | 24.66 |
| CDY36861 | Canola | nucleus | 25.42 | 24.06 |
| CDY50677 | Canola | nucleus | 24.86 | 23.91 |
| CDY14162 | Canola | endoplasmic reticulum | 21.47 | 22.69 |
| CDY04907 | Canola | endoplasmic reticulum | 21.47 | 22.69 |
| CDY64325 | Canola | cytosol | 23.45 | 22.25 |
| CDY41417 | Canola | mitochondrion | 16.95 | 20.07 |
| CDX85648 | Canola | nucleus | 20.9 | 18.73 |
| CDX91120 | Canola | nucleus | 18.64 | 17.6 |
| CDX78523 | Canola | nucleus | 19.77 | 15.7 |
| CDX70505 | Canola | nucleus | 19.49 | 15.47 |
| CDY41676 | Canola | cytosol, plastid | 21.19 | 13.04 |
| CDY67405 | Canola | cytosol | 21.19 | 12.95 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.06 | 12.72 |
| CDY04137 | Canola | cytosol, plastid | 19.21 | 12.08 |
| CDY45197 | Canola | nucleus, plastid | 19.77 | 12.01 |
| CDY04138 | Canola | cytosol, plastid | 18.93 | 11.94 |
| CDY03037 | Canola | cytosol | 19.21 | 11.76 |
| CDY19251 | Canola | cytosol, mitochondrion | 18.36 | 11.61 |
| CDY26720 | Canola | cytosol, mitochondrion | 18.36 | 11.52 |
| CDY17427 | Canola | cytosol, plastid | 18.36 | 11.46 |
| CDX96693 | Canola | nucleus | 20.9 | 11.0 |
| CDX75112 | Canola | cytosol | 3.95 | 10.07 |
| CDY49085 | Canola | cytosol | 16.95 | 9.79 |
| CDX83739 | Canola | nucleus | 19.77 | 9.47 |
| CDY39317 | Canola | cytosol | 15.82 | 9.23 |
| CDY62588 | Canola | nucleus | 19.21 | 9.18 |
| CDY44186 | Canola | nucleus, plastid | 18.93 | 9.17 |
| CDY29389 | Canola | nucleus, plastid | 18.93 | 8.96 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EnsemblPlants:CDX70019 | ProteinID:CDX70019 | ProteinID:CDX70019.1 | InterPro:DUF4005 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00136115001 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF11 |
| SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI0004EE75D1 | SEG:seg | : | : |
Description
BnaA10g23680D
Coordinates
chrLK031790:+:2728676..2730492
Molecular Weight (calculated)
39693.4 Da
IEP (calculated)
11.232
GRAVY (calculated)
-0.842
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFGRLFGS KKKQEKSSLT NNNRRKWSFT ARSSNPATAL SASSSHPSKR RSDEGVLDAN QHAIAVAAAT AAVAEAALAA AHAAAEVVRL TGRGSGRASS
101: VNQTNRNNRR WSQEYAAAIK IQSAFRGYLA RRALRALKAL VKLQALVKGH IVRKQTADML RRMQTLVRLQ ARARASRSSH VSESLSEAEY IKLIAMDHHH
201: NHRSQMGSSR WNAPLYSEDN DKILEVDTWK PHFPSYHKES PRKRGSLMVP TSVNNSPQVR SRPGSSSGGG SRRRTPFTPT RSEYEYYSGY HPNYMANTES
301: YRAKVRSQSA PRQRLREFSS ESGYKRSGQG QYYYYTAAAE RSFDQRSDYG GVYF
101: VNQTNRNNRR WSQEYAAAIK IQSAFRGYLA RRALRALKAL VKLQALVKGH IVRKQTADML RRMQTLVRLQ ARARASRSSH VSESLSEAEY IKLIAMDHHH
201: NHRSQMGSSR WNAPLYSEDN DKILEVDTWK PHFPSYHKES PRKRGSLMVP TSVNNSPQVR SRPGSSSGGG SRRRTPFTPT RSEYEYYSGY HPNYMANTES
301: YRAKVRSQSA PRQRLREFSS ESGYKRSGQG QYYYYTAAAE RSFDQRSDYG GVYF
001: MGFFGRLFGS KKQEKATPNR RRWSFATRSS HPENDSSSHS SKRRGDEDVL NGDKHAIAVA AATAAVAEAA LAAARAAAEV VRLTNGGRNS SVKQISRSNR
101: RWSQEYKAAM KIQSAFRGYL ARRALRALKA LVKLQALVKG HIVRKQTADM LRRMQTLVRL QARARASRSS HVSDSSHPPT LMIPSSPQSF HARCVSEAEY
201: SKVIAMDHHH NNHRSPMGSS RLLDQWRTEE SLWSAPKYNE DDDKILEVDT WKPHFRESPR KRGSLVVPTS VENSPQLRSR TGSSSGGSRR KTPFTPARSE
301: YEYYSGYHPN YMANTESYKA KVRSQSAPRQ RLQDLPSESG YKRSIQGQYY YYTPAAERSF DQRSDNGIAG YRGVSDGLDR NQSDKSKMYT SFFSSNPLFF
401: Q
101: RWSQEYKAAM KIQSAFRGYL ARRALRALKA LVKLQALVKG HIVRKQTADM LRRMQTLVRL QARARASRSS HVSDSSHPPT LMIPSSPQSF HARCVSEAEY
201: SKVIAMDHHH NNHRSPMGSS RLLDQWRTEE SLWSAPKYNE DDDKILEVDT WKPHFRESPR KRGSLVVPTS VENSPQLRSR TGSSSGGSRR KTPFTPARSE
301: YEYYSGYHPN YMANTESYKA KVRSQSAPRQ RLQDLPSESG YKRSIQGQYY YYTPAAERSF DQRSDNGIAG YRGVSDGLDR NQSDKSKMYT SFFSSNPLFF
401: Q
Arabidopsis Description
IQD24IQ-domain 24 [Source:TAIR;Acc:AT5G07240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.