Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98786 | Canola | nucleus | 90.3 | 88.21 |
| Bra019337.1-P | Field mustard | nucleus | 87.07 | 85.77 |
| CDX98787 | Canola | mitochondrion | 54.09 | 84.8 |
| CDY41368 | Canola | mitochondrion, plastid | 68.53 | 75.71 |
| CDY41252 | Canola | cytosol, mitochondrion | 79.09 | 75.2 |
| CDY53133 | Canola | nucleus | 78.66 | 75.1 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 77.16 | 73.97 |
| CDX76341 | Canola | mitochondrion, plastid | 66.59 | 73.57 |
| CDX90650 | Canola | mitochondrion | 9.91 | 44.66 |
| CDY29016 | Canola | mitochondrion | 9.7 | 43.69 |
| GSMUA_Achr8P11920_001 | Banana | cytosol | 33.62 | 43.45 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 45.04 | 42.31 |
| KRH03972 | Soybean | cytosol | 40.3 | 41.83 |
| KRH57246 | Soybean | cytosol | 38.58 | 40.22 |
| Solyc08g007930.1.1 | Tomato | cytosol | 19.61 | 40.09 |
| Solyc08g007920.1.1 | Tomato | cytosol | 20.04 | 39.74 |
| Solyc08g080470.2.1 | Tomato | plastid | 42.67 | 39.68 |
| KRH77498 | Soybean | cytosol, mitochondrion | 33.84 | 39.65 |
| EES12687 | Sorghum | cytosol, mitochondrion | 39.66 | 39.4 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 42.46 | 39.4 |
| Zm00001d002630_P002 | Maize | mitochondrion | 38.79 | 39.39 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 39.01 | 39.01 |
| CDX75112 | Canola | cytosol | 11.42 | 38.13 |
| GSMUA_Achr5P20090_001 | Banana | cytosol, mitochondrion | 37.72 | 38.13 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 35.78 | 37.9 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 34.91 | 37.76 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 37.07 | 37.39 |
| Zm00001d026084_P001 | Maize | mitochondrion | 39.87 | 37.3 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 37.07 | 37.23 |
| CDX98994 | Canola | mitochondrion | 28.02 | 36.72 |
| CDX70019 | Canola | cytosol, mitochondrion | 28.02 | 36.72 |
| PGSC0003DMT400014796 | Potato | cytosol | 28.23 | 36.39 |
| CDX78285 | Canola | plastid | 26.94 | 36.34 |
| CDX73724 | Canola | mitochondrion | 10.13 | 36.15 |
| CDX86928 | Canola | mitochondrion, plastid | 29.96 | 35.28 |
| CDY00253 | Canola | plastid | 29.96 | 35.28 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 27.37 | 34.89 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 31.47 | 34.52 |
| CDY00251 | Canola | plastid | 30.17 | 34.06 |
| CDY29768 | Canola | cytosol | 11.85 | 32.93 |
| CDX81042 | Canola | plastid | 27.16 | 32.56 |
| CDX78003 | Canola | mitochondrion | 10.56 | 32.24 |
| CDY43103 | Canola | cytosol | 25.22 | 31.79 |
| CDX92076 | Canola | cytosol | 25.65 | 30.75 |
| CDX75883 | Canola | cytosol | 24.57 | 30.4 |
| CDY46537 | Canola | cytosol, mitochondrion | 18.97 | 30.34 |
| CDX82400 | Canola | cytosol | 24.14 | 30.03 |
| CDY53440 | Canola | mitochondrion | 18.75 | 30.0 |
| CDY67178 | Canola | cytosol, mitochondrion | 24.57 | 29.38 |
| CDY68636 | Canola | cytosol | 24.57 | 29.31 |
| CDY45643 | Canola | cytosol | 20.47 | 29.14 |
| CDY47784 | Canola | mitochondrion | 23.71 | 28.35 |
| CDY30233 | Canola | mitochondrion | 23.06 | 27.58 |
| CDY50677 | Canola | nucleus | 21.34 | 26.9 |
| CDY41423 | Canola | cytosol, mitochondrion | 16.59 | 26.28 |
| CDY36861 | Canola | nucleus | 21.12 | 26.2 |
| CDX70272 | Canola | cytosol, mitochondrion | 16.38 | 25.94 |
| CDY72577 | Canola | cytosol, mitochondrion | 16.16 | 25.86 |
| CDY64325 | Canola | cytosol | 20.26 | 25.2 |
| CDY14162 | Canola | endoplasmic reticulum | 16.81 | 23.28 |
| CDY04907 | Canola | endoplasmic reticulum | 16.81 | 23.28 |
| CDY41417 | Canola | mitochondrion | 13.36 | 20.74 |
| CDX85648 | Canola | nucleus | 15.73 | 18.48 |
| CDX91120 | Canola | nucleus | 14.87 | 18.4 |
| CDX70505 | Canola | nucleus | 15.73 | 16.37 |
| CDX78523 | Canola | nucleus | 15.52 | 16.14 |
| CDX83805 | Canola | cytosol, mitochondrion | 15.95 | 13.26 |
| CDY19251 | Canola | cytosol, mitochondrion | 15.95 | 13.21 |
| CDY26720 | Canola | cytosol, mitochondrion | 15.73 | 12.94 |
| CDY67405 | Canola | cytosol | 15.3 | 12.26 |
| CDY41676 | Canola | cytosol, plastid | 15.09 | 12.17 |
| CDY45197 | Canola | nucleus, plastid | 14.01 | 11.15 |
| CDY03037 | Canola | cytosol | 13.79 | 11.07 |
| CDY04138 | Canola | cytosol, plastid | 13.36 | 11.05 |
| CDY04137 | Canola | cytosol, plastid | 13.36 | 11.01 |
| CDX96693 | Canola | nucleus | 15.95 | 11.0 |
| CDY17427 | Canola | cytosol, plastid | 13.36 | 10.93 |
| CDY49085 | Canola | cytosol | 14.44 | 10.93 |
| CDY39317 | Canola | cytosol | 13.79 | 10.54 |
| CDX83739 | Canola | nucleus | 16.38 | 10.28 |
| CDY62588 | Canola | nucleus | 15.95 | 9.99 |
| CDY44186 | Canola | nucleus, plastid | 14.87 | 9.44 |
| CDY29389 | Canola | nucleus, plastid | 14.87 | 9.22 |
Protein Annotations
| EnsemblPlants:CDX94150 | EnsemblPlantsGene:GSBRNA2T00157069001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF13 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX94150 | ProteinID:CDX94150.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EDE012 | MapMan:35.2 | : | : | : | : |
Description
BnaC07g37840D
Coordinates
chrLK031879:+:980012..982558
Molecular Weight (calculated)
52084.1 Da
IEP (calculated)
10.762
GRAVY (calculated)
-0.803
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKASRWFWN LLGFKKPDPG YPDPSFETPS RSYPKRRWRF VKSKRENGTA PQSHYPHTPP SLPNSTPPPA SSYHRSSPSS NGRRWKQKLV WEDERDEDSD
101: KHAIAMATAT ALVSEAAVTA AKAAAAVVRL RSKSGRLTHS PIATHFSDGY SDVVAHHSSF DGHRRDSRDD LAVIKIQSIF RGYLARRALR ALKGLVKLQA
201: IVRGHIERKR MSIHLRRMHA LVRAQARVRA TRVIVTPESS SSQSNNTKSS HFQNTDPPTP EKQEHSISLC SSKLGHSHIF KRNGSMANNN NRPLSAMNEE
301: EKILEMDRRH NKSYTRRNRP DMFYSSHLIL DNSGRSGPVY TFQLSPFSSH EETVNQFCTA ENSPQVHSAT SISKGSAFTA SSVAPSDCTK SCCYADHPRF
401: MACTESSRAK ARSASAPKSR PQLYYEQSSS KRFGFVDVHT SFMNKAYPGS GRLDRLGMPT GYRY
101: KHAIAMATAT ALVSEAAVTA AKAAAAVVRL RSKSGRLTHS PIATHFSDGY SDVVAHHSSF DGHRRDSRDD LAVIKIQSIF RGYLARRALR ALKGLVKLQA
201: IVRGHIERKR MSIHLRRMHA LVRAQARVRA TRVIVTPESS SSQSNNTKSS HFQNTDPPTP EKQEHSISLC SSKLGHSHIF KRNGSMANNN NRPLSAMNEE
301: EKILEMDRRH NKSYTRRNRP DMFYSSHLIL DNSGRSGPVY TFQLSPFSSH EETVNQFCTA ENSPQVHSAT SISKGSAFTA SSVAPSDCTK SCCYADHPRF
401: MACTESSRAK ARSASAPKSR PQLYYEQSSS KRFGFVDVHT SFMNKAYPGS GRLDRLGMPT GYRY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.