Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006201.1-P | Field mustard | nucleus | 98.21 | 97.99 |
| CDX78523 | Canola | nucleus | 97.76 | 97.76 |
| CDX85648 | Canola | nucleus | 75.11 | 84.81 |
| AT5G13460.1 | Thale cress | nucleus | 84.08 | 84.65 |
| CDX91120 | Canola | nucleus | 65.47 | 77.87 |
| KRH23930 | Soybean | nucleus | 45.52 | 44.13 |
| KRH39865 | Soybean | nucleus | 46.19 | 43.92 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 44.39 | 42.22 |
| KRH63082 | Soybean | cytosol | 41.7 | 41.33 |
| KRH29958 | Soybean | cytosol, mitochondrion | 42.15 | 41.14 |
| CDX90650 | Canola | mitochondrion | 9.19 | 39.81 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 40.58 | 39.52 |
| CDY29016 | Canola | mitochondrion | 8.97 | 38.84 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 36.32 | 37.67 |
| CDX70272 | Canola | cytosol, mitochondrion | 20.18 | 30.72 |
| CDY41423 | Canola | cytosol, mitochondrion | 19.73 | 30.03 |
| CDX73724 | Canola | mitochondrion | 8.74 | 30.0 |
| CDY72577 | Canola | cytosol, mitochondrion | 19.06 | 29.31 |
| CDY14162 | Canola | endoplasmic reticulum | 20.85 | 27.76 |
| CDY04907 | Canola | endoplasmic reticulum | 20.85 | 27.76 |
| CDY41417 | Canola | mitochondrion | 18.16 | 27.09 |
| CDX78003 | Canola | mitochondrion | 9.19 | 26.97 |
| CDY29768 | Canola | cytosol | 10.09 | 26.95 |
| CDY53440 | Canola | mitochondrion | 17.26 | 26.55 |
| CDY46537 | Canola | cytosol, mitochondrion | 17.04 | 26.21 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 25.56 | 23.95 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 23.99 | 23.83 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 25.34 | 23.54 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 24.89 | 23.32 |
| Os03t0355700-00 | Rice | cytosol | 22.65 | 22.39 |
| CDY45643 | Canola | cytosol | 16.37 | 22.39 |
| CDX75883 | Canola | cytosol | 17.71 | 21.07 |
| EER94844 | Sorghum | cytosol | 23.32 | 20.84 |
| CDY50677 | Canola | nucleus | 17.04 | 20.65 |
| CDY36861 | Canola | nucleus | 17.26 | 20.59 |
| Zm00001d029197_P001 | Maize | nucleus | 21.75 | 20.38 |
| CDX82400 | Canola | cytosol | 17.04 | 20.38 |
| CDY43103 | Canola | cytosol | 16.59 | 20.11 |
| CDX92076 | Canola | cytosol | 17.26 | 19.9 |
| CDY00253 | Canola | plastid | 17.49 | 19.8 |
| CDX86928 | Canola | mitochondrion, plastid | 17.49 | 19.8 |
| CDY68636 | Canola | cytosol | 17.26 | 19.79 |
| CDX98994 | Canola | mitochondrion | 15.7 | 19.77 |
| CDX78285 | Canola | plastid | 15.25 | 19.77 |
| CDY67178 | Canola | cytosol, mitochondrion | 17.04 | 19.59 |
| CDX70019 | Canola | cytosol, mitochondrion | 15.47 | 19.49 |
| CDY00251 | Canola | plastid | 17.71 | 19.22 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 23.77 | 19.06 |
| CDY64325 | Canola | cytosol | 15.25 | 18.23 |
| CDX98787 | Canola | mitochondrion | 11.88 | 17.91 |
| CDX81042 | Canola | plastid | 15.47 | 17.83 |
| CDY41368 | Canola | mitochondrion, plastid | 16.59 | 17.62 |
| CDY30233 | Canola | mitochondrion | 15.25 | 17.53 |
| CDY47784 | Canola | mitochondrion | 15.25 | 17.53 |
| CDX76341 | Canola | mitochondrion, plastid | 16.14 | 17.14 |
| CDY53133 | Canola | nucleus | 17.71 | 16.26 |
| CDX98786 | Canola | nucleus | 17.04 | 16.0 |
| CDY41252 | Canola | cytosol, mitochondrion | 17.49 | 15.98 |
| CDX94150 | Canola | nucleus | 16.37 | 15.73 |
| CDX83805 | Canola | cytosol, mitochondrion | 19.51 | 15.59 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.28 | 15.36 |
| CDY67405 | Canola | cytosol | 19.51 | 15.03 |
| CDY26720 | Canola | cytosol, mitochondrion | 18.83 | 14.89 |
| CDY41676 | Canola | cytosol, plastid | 18.39 | 14.26 |
| CDY03037 | Canola | cytosol | 17.26 | 13.32 |
| CDY45197 | Canola | nucleus, plastid | 17.26 | 13.21 |
| CDX96693 | Canola | nucleus | 19.73 | 13.08 |
| CDY04138 | Canola | cytosol, plastid | 16.37 | 13.01 |
| CDY04137 | Canola | cytosol, plastid | 16.37 | 12.97 |
| CDY17427 | Canola | cytosol, plastid | 16.37 | 12.87 |
| CDY44186 | Canola | nucleus, plastid | 17.49 | 10.67 |
| CDY62588 | Canola | nucleus | 17.71 | 10.66 |
| CDX83739 | Canola | nucleus | 17.49 | 10.55 |
| CDY29389 | Canola | nucleus, plastid | 17.49 | 10.43 |
| CDY39317 | Canola | cytosol | 14.13 | 10.38 |
| CDY49085 | Canola | cytosol | 13.68 | 9.95 |
| CDX75112 | Canola | cytosol | 2.02 | 6.47 |
Protein Annotations
| EnsemblPlants:CDX70505 | EnsemblPlantsGene:GSBRNA2T00140334001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF35 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX70505 | ProteinID:CDX70505.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EDE943 | MapMan:35.1 | : | : | : | : |
Description
BnaC03g05890D
Coordinates
chrLK031791:+:773946..776492
Molecular Weight (calculated)
50837.2 Da
IEP (calculated)
10.812
GRAVY (calculated)
-0.938
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNKKGLFTL LKRVFISEAN SEKKEKRRRW TFWKLKVRKR LPTITAPPPE NGTRNESHEE QKEESVSEVG EVSQVSSSQK LDSIEKLEGS TSPETAHLVA
101: QYQLFLNREE EALAATRIQT AFRGHLARKA LRALKGIVKL QAYIRGRAVR RQAMTTLKCL QSVVNIQSQV CGKRTQIPPR GSQRDYEESH MFSENILKVD
201: TNGQKRWDDS LLTKEEARAV VMGKREAALR RERIKEYAVT HRKSAESYQK RSNTKWKYWL DEWVDTQRTK SKELEDLDLS LRTKTKDETM NKTPRNSSPR
301: RLVSNSNNHR RQASISEEEQ QNPVAAVTVN TPTYMVATES AKAKSRSLSS PRIRPRSFDT QSESYSPYKN KLCLTTSVMS EAPSRVRVGN SNGNNSRASA
401: YQQRSPGLRG FSIGPLKSCN NGGLLNDLSI NSERSLPSWS KQSSLR
101: QYQLFLNREE EALAATRIQT AFRGHLARKA LRALKGIVKL QAYIRGRAVR RQAMTTLKCL QSVVNIQSQV CGKRTQIPPR GSQRDYEESH MFSENILKVD
201: TNGQKRWDDS LLTKEEARAV VMGKREAALR RERIKEYAVT HRKSAESYQK RSNTKWKYWL DEWVDTQRTK SKELEDLDLS LRTKTKDETM NKTPRNSSPR
301: RLVSNSNNHR RQASISEEEQ QNPVAAVTVN TPTYMVATES AKAKSRSLSS PRIRPRSFDT QSESYSPYKN KLCLTTSVMS EAPSRVRVGN SNGNNSRASA
401: YQQRSPGLRG FSIGPLKSCN NGGLLNDLSI NSERSLPSWS KQSSLR
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.