Factsheet for Bra006201.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78523	Canola	nucleus	98.43	98.65
CDX70505	Canola	nucleus	97.99	98.21
Bra023414.1-P	Field mustard	nucleus	75.62	85.57
AT5G13460.1	Thale cress	nucleus	84.12	84.88
KRH23930	Soybean	nucleus	45.86	44.57
KRH39865	Soybean	nucleus	46.53	44.35
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	44.52	42.43
KRH63082	Soybean	cytosol	42.28	42.0
KRH29958	Soybean	cytosol, mitochondrion	42.73	41.79
Bra012855.1-P	Field mustard	mitochondrion	9.17	39.81
Solyc01g088250.2.1	Tomato	cytosol, plastid	40.72	39.74
PGSC0003DMT400017589	Potato	cytosol, plastid	36.47	37.91
Bra028807.1-P	Field mustard	mitochondrion	25.28	29.74
Bra009498.1-P	Field mustard	cytosol, mitochondrion	23.94	28.01
Bra036812.1-P	Field mustard	mitochondrion	9.17	26.62
Bra014304.1-P	Field mustard	cytosol, mitochondrion	17.0	26.21
TraesCS5A01G163000.1	Wheat	nucleus	25.5	23.95
GSMUA_Achr3P17450_001	Banana	nucleus	23.94	23.83
TraesCS5D01G168000.2	Wheat	nucleus	25.28	23.54
TraesCS5B01G160400.1	Wheat	cytosol	24.83	23.32
Os03t0355700-00	Rice	cytosol	22.6	22.39
Bra030407.1-P	Field mustard	cytosol	16.55	21.96
EER94844	Sorghum	cytosol	23.27	20.84
Bra001633.1-P	Field mustard	cytosol	17.23	20.64
Bra039715.1-P	Field mustard	nucleus, plastid	17.0	20.54
Zm00001d029197_P001	Maize	nucleus	21.7	20.38
Bra022163.1-P	Field mustard	cytosol	17.23	19.9
Bra005929.1-P	Field mustard	plastid	15.21	19.83
Bra021181.1-P	Field mustard	cytosol	17.23	19.79
Bra009281.1-P	Field mustard	mitochondrion	15.66	19.77
Bra036898.1-P	Field mustard	cytosol	16.11	19.67
Bra010055.1-P	Field mustard	plastid	17.45	19.26
HORVU5Hr1G050840.5	Barley	cytosol, plastid	23.71	19.06
Bra008163.1-P	Field mustard	cytosol	20.81	18.02
Bra024161.1-P	Field mustard	mitochondrion	15.21	17.53
Bra020822.1-P	Field mustard	mitochondrion, plastid	16.11	17.14
Bra013672.1-P	Field mustard	mitochondrion, nucleus	17.45	15.73
Bra019337.1-P	Field mustard	nucleus	16.33	15.5
Bra026581.1-P	Field mustard	cytosol	19.46	15.05
Bra025690.1-P	Field mustard	cytosol, mitochondrion	18.79	14.89
Bra024806.1-P	Field mustard	cytosol, plastid	17.23	13.16
Bra016536.1-P	Field mustard	nucleus	19.69	13.08
Bra017409.1-P	Field mustard	cytosol, plastid	16.11	12.74
Bra016490.1-P	Field mustard	nucleus	17.67	10.69
Bra025777.1-P	Field mustard	nucleus, plastid	17.0	10.22
Bra019653.1-P	Field mustard	cytosol	14.32	10.19

Protein Annotations

EnsemblPlants:Bra006201.1	EnsemblPlants:Bra006201.1-P	EnsemblPlantsGene:Bra006201	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF35
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000253FA5D
UniProt:M4CPR2	MapMan:35.1	:	:	:	:

Description

AT5G13460 (E=5e-171) IQD11 | IQD11 (IQ-domain 11); calmodulin binding

Coordinates

chrA03:+:2489841..2492012

Molecular Weight (calculated)

50905.2 Da

IEP (calculated)

10.812

GRAVY (calculated)

-0.919

Length

447 amino acids

Sequence
(BLAST)

001: MTNKKGLFTL LKRVFISEAN SEKKEKRRRW TFWKLKVRKR LPTITAPPTE NGTRSESHEE QKEESVSEVG EVSHVSSSQK LDSIEKLEGS TSPDTAHLVA
101: QYQLFLNREE EALAATRIQT AFRGHLARKA LRALKGIVKL QAYIRGRAVR RQAMTTLKCL QSVVNIQSQV CGKRTQIPPR GSHRDYEESH MFSENILKVD
201: TNGQKRWDDS LLTKEEARAV VMSKREAALR RERIKEYAVT HRKSAESYQK RSNTKWKYWL DEWVDTQRTK SKELEDLDLS LRTKTKDETM NKTPRNSSPR
301: RLVSNSNNHR RQASISEEEP QNPVAAVTVT TTPTYMVATE SAKAKSRSLS SPRIRPRSFD TQSESYSPYK NKLCLTTSVM SEAPSRVRVG NSNGNNSRAS
401: AYQQRSPGLR GFSIGPLKSC NNGGLLNDLS INSERSLPSW SKQSSLR

Best Arabidopsis Sequence Match ( AT5G13460.1 )
(BLAST)

001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR

Arabidopsis Description

IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.