Factsheet for Bra016490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62588	Canola	nucleus	94.86	94.6
Bra025777.1-P	Field mustard	nucleus, plastid	79.03	78.49
AT1G19870.1	Thale cress	nucleus	76.18	70.91
VIT_18s0001g13870.t01	Wine grape	nucleus	38.7	36.11
GSMUA_Achr1P19900_001	Banana	cytosol	10.28	32.62
KRH51729	Soybean	cytosol	37.21	32.39
Bra012855.1-P	Field mustard	mitochondrion	4.47	32.04
Solyc04g081210.2.1	Tomato	nucleus	36.67	31.44
PGSC0003DMT400009545	Potato	nucleus	36.81	31.34
GSMUA_Achr1P06080_001	Banana	nucleus	30.58	29.01
GSMUA_Achr3P11240_001	Banana	nucleus	28.42	26.89
KRH61064	Soybean	nucleus	26.12	26.55
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	28.55	24.94
GSMUA_Achr1P19910_001	Banana	nucleus	19.89	24.58
TraesCS2B01G520500.3	Wheat	nucleus	28.28	24.39
TraesCS2A01G492300.1	Wheat	nucleus	28.28	24.27
TraesCS2D01G492600.1	Wheat	nucleus	28.15	24.16
EES11606	Sorghum	nucleus	28.42	23.7
Os04t0663100-01	Rice	plasma membrane	28.15	23.29
Bra014304.1-P	Field mustard	cytosol, mitochondrion	9.07	23.1
Zm00001d026535_P003	Maize	nucleus	27.2	22.31
Zm00001d001953_P003	Maize	nucleus	27.06	21.81
Bra008163.1-P	Field mustard	cytosol	15.16	21.71
Bra036812.1-P	Field mustard	mitochondrion	4.47	21.43
Bra039715.1-P	Field mustard	nucleus, plastid	10.55	21.08
Bra030407.1-P	Field mustard	cytosol	9.61	21.07
Bra009281.1-P	Field mustard	mitochondrion	9.74	20.34
Bra023414.1-P	Field mustard	nucleus	10.55	19.75
Bra026581.1-P	Field mustard	cytosol	15.29	19.55
Bra021181.1-P	Field mustard	cytosol	10.15	19.28
Bra005929.1-P	Field mustard	plastid	8.8	18.95
Bra017409.1-P	Field mustard	cytosol, plastid	14.48	18.94
Bra001633.1-P	Field mustard	cytosol	9.47	18.77
Bra010055.1-P	Field mustard	plastid	10.28	18.77
Bra024161.1-P	Field mustard	mitochondrion	9.61	18.3
Bra024806.1-P	Field mustard	cytosol, plastid	14.34	18.12
Bra036898.1-P	Field mustard	cytosol	8.93	18.03
Bra006201.1-P	Field mustard	nucleus	10.69	17.67
Bra022163.1-P	Field mustard	cytosol	9.07	17.31
Bra025690.1-P	Field mustard	cytosol, mitochondrion	13.13	17.2
Bra019337.1-P	Field mustard	nucleus	10.28	16.14
Bra020822.1-P	Field mustard	mitochondrion, plastid	8.8	15.48
Bra016536.1-P	Field mustard	nucleus	14.07	15.45
Bra019653.1-P	Field mustard	cytosol	12.99	15.29
Bra028807.1-P	Field mustard	mitochondrion	7.85	15.26
Bra009498.1-P	Field mustard	cytosol, mitochondrion	7.85	15.18
Bra013672.1-P	Field mustard	mitochondrion, nucleus	10.15	15.12
HORVU2Hr1G124440.1	Barley	cytosol	0.68	8.2

Protein Annotations

EnsemblPlants:Bra016490.1	EnsemblPlants:Bra016490.1-P	EnsemblPlantsGene:Bra016490	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002546D3A
UniProt:M4DJ13	MapMan:35.1	:	:	:	:

Description

AT1G19870 (E=2e-191) iqd32 | iqd32 (IQ-domain 32); calmodulin binding

Coordinates

chrA08:+:18696812..18699705

Molecular Weight (calculated)

80129.3 Da

IEP (calculated)

6.403

GRAVY (calculated)

-0.787

Length

739 amino acids

Sequence
(BLAST)

001: MGRSPASSCL RIIACSGGDD AASEPTSNAL ESKSSGDKRG WSFRKKSGKQ RGVMITSVAV SESSPASRSR ETLESALLLK SPSPDNNNIV DEKQTFSVVD
101: DEKKKSQLPV VAYVAEPVDV NKATEVAVLV ESKGTETEED GLIETELQSK LEGADATVIE KDSTPEVEEV EKDDVIIIRK EVDDSVVIII QAAIRGFLAR
201: RELLRRKKVV KLQAAVRGHL VRNQAMGSLR CVQAIVKMQT LVRARHSAKD GSRVSAISDK AESNAAAQKL LENKFAKHLM ESTPKTKPIS IKCDPTKPSS
301: AWSWLERWMS VSKPEKTPKP DLALEETNNA KVSSQVDLVS SDSTLETEAE TGFSSKVVDH HVELSETEKM SQCDSPQASA EVDHDLMIQS HPPAAKDTEA
401: GYVDEEPKPS LKRKASNPSF AAAKSKFEEL TSSSAGSKKA MTLSSKEGKT DIDSLEADTT TTKKDQSVEE VAPAENNGSE CGTELSVTSS LDSLDKKSDF
501: EGAESKAQAK LLENSTPKAD QSELIEIDVK SKTPLATVED SKDEVEVLVT QHESVITTPD SKKRRAEDES GPQANSLPEE AVTPMTITES QATPASQASS
601: SVNARKEKSG KSGGSSQKRK VSKKIASSPK QETDTTIEQE GKEQRSGRRN SFGYDQEARE SSSGGKNSIP RFMQPTQSAK AKVQEHNSPR SSPDVQEREV
701: SVKKRHSLPV VANGKQVSPR IQRSASQAQP GTKDRKWQR

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.