CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001953_P003	Maize	nucleus	87.92	84.95
Zm00001d026535_P003	Maize	nucleus	85.67	84.24
TraesCS2D01G492600.1	Wheat	nucleus	62.75	64.58
TraesCS2A01G492300.1	Wheat	nucleus	62.53	64.34
TraesCS2B01G520500.3	Wheat	nucleus	61.74	63.83
HORVU2Hr1G109850.3	Barley	nucleus	49.89	61.82
Os04t0663100-01	Rice	plasma membrane	61.29	60.81
GSMUA_Achr3P11240_001	Banana	nucleus	32.05	36.36
GSMUA_Achr1P06080_001	Banana	nucleus	29.91	34.02
VIT_18s0001g13870.t01	Wine grape	nucleus	29.57	33.08
GSMUA_Achr1P19910_001	Banana	nucleus	22.23	32.94
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	30.36	31.8
Solyc04g081210.2.1	Tomato	nucleus	30.14	30.97
GSMUA_Achr1P19900_001	Banana	cytosol	8.13	30.9
PGSC0003DMT400009545	Potato	nucleus	29.91	30.53
CDX83739	Canola	nucleus	23.81	28.55
Bra016490.1-P	Field mustard	nucleus	23.7	28.42
CDY44186	Canola	nucleus, plastid	23.36	28.32
KRH51729	Soybean	cytosol	26.98	28.15
CDY62588	Canola	nucleus	23.48	28.07
Bra025777.1-P	Field mustard	nucleus, plastid	23.14	27.55
CDY29389	Canola	nucleus, plastid	23.14	27.41
AT1G19870.1	Thale cress	nucleus	23.48	26.2
KRH61064	Soybean	nucleus	19.86	24.21
KXG22418	Sorghum	cytosol, plastid	13.77	21.07
EES12687	Sorghum	cytosol, mitochondrion	10.84	20.56
KXG40135	Sorghum	cytosol, mitochondrion	9.37	19.95
KXG33342	Sorghum	mitochondrion	8.58	19.19
KXG33252	Sorghum	cytosol	11.74	18.6
EES02320	Sorghum	mitochondrion	9.82	18.12
EER93770	Sorghum	cytosol, mitochondrion	9.93	17.96
OQU91764	Sorghum	mitochondrion, plastid	10.16	17.82
KXG22374	Sorghum	mitochondrion	8.01	17.79
KXG21487	Sorghum	cytosol, mitochondrion	9.82	17.65
EER94844	Sorghum	cytosol	9.03	16.03
OQU79535	Sorghum	cytosol, mitochondrion	8.13	15.55
OQU93295	Sorghum	plastid	4.18	13.07
KXG30090	Sorghum	mitochondrion	3.61	10.39
KXG30089	Sorghum	cytosol, mitochondrion, plastid	2.14	8.44
CDX75112	Canola	cytosol	1.24	7.91

Protein Annotations

EnsemblPlants:EES11606	EnsemblPlantsGene:SORBI_3006G254500	EntrezGene:8070280	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612
PFscan:PS50096	ProteinID:EES11606	ProteinID:EES11606.1	RefSeq:XP_002447278.1	SEG:seg	unigene:Sbi.9735
UniParc:UPI0001A8724F	UniProt:C5Y9Y3	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:59205287..59210822

Molecular Weight (calculated)

97335.4 Da

IEP (calculated)

4.602

GRAVY (calculated)

-0.934

Length

886 amino acids

Sequence
(BLAST)

001: MARSKNGCLK ILVCAGSGSD PAAGSDADAD DHPDENKAIS DKSRWSFRRR STRHRVLKNS DISEPETLSS SKAKADITPS NNVYTSTYSY ASEKPLQHDK
101: PDEKILHQEP EEKPLHQENS DEKLMEKPIE KPINKLMEEP ADQIFEKSIE LPTQKITESP TDEPAEKIND APTEEPAEKI TETAYENTAE GKIENATEET
201: PERAVEELIE EPDETISVSS TGPKQGENTS LVEGSSADPE EDHLDSAATN LQPVSGTCIA TEELLNQKDL VKLQAVIRGH LVRKQASESL QCLLAIVKIQ
301: GLIRAHQAQH SPGKIQETVV HSSGEKLLRN GFALKLMDNT STLKSIRVKC DPSESDVTWE WMERWTALIP PITVEHLPEH EENSELGETV TEQVTELSQC
401: DEDIVELDSD LSFPKLVADD VKEKVETSDS SALEAPASVP DESPKMEIKH DPESELIETT NVDAEQVTDQ KADNDVDEFF MSLDQQYTQA DASRDPCPLP
501: GKFESSNEDS GDAYNSEQTQ EMEGKRFVAR KSCNPAFAAA QLKFEELSTN STVSRSNSSS HLDGVNKSRV HTPSSQEDYS SKQDGTGIQE SSVGHDTKMI
601: VAASECGTEI SISSTLDSPD RSEGDGGEIV MEIGALENRN YVTGKADKDS NIVHSEVKSA PEVEAQPQKE VEQNGHVPAL EIEAQPQKEL VQESHVEPEM
701: SADLHEQFEK SVASYATPEG TPMSRTTIAE SHGTPSSEVS VNTKKSRSKK PKSHASKRSL ASPGSESVGR SSTDNFSKES RHAKRESSSK GAKSDHIDQE
801: PRMSNSNSNP LPSYMQFTES ARAKTSSPKM SPDVQESNPR KRHSLPMTNG KHDSSPRMQR SSSQVQQNVK SNGPAPHNAS DKRWHI

Best Arabidopsis Sequence Match ( AT1G19870.2 )
(BLAST)

001: MASKVEPEES ESDDVIIVRK ESDEKVDEKL DESVIVVIQA AVRGFLARRE LLRSKKVIKL QAAVRGHLVR SQAMGSLRCV QAIVKMQAMV RARHSTKDGS
101: RVSATSDKSE PNAAAQKLLE NKFAKHLMES TPKTKPINIK CDPTKPSSAW NWLERWMSVP KPEKTSKANL TTEEQNLEET QNVKISPQAD FVNSDSTVEN
201: KTETDMPSYE ASKVEGQNVE LSETEKMSQY DSPEASAEVY YDSIQSQPLA AKPDSLLEEP EYVDGQIKHS LKRKVSNPSF IAAQSKFEEL TSSTGSNKAM
301: TLSSKDDVLG EEGKTDIDSP DTTNTIKDHS LEDVTPAELS GSECGTELSV TSSLDTLEKK SDAEGAEPRV EAKLLEDDTF KTDQAELIEI DVKDATSMGT
401: VEDPKEKVEN AKDEVEISAT HHEPVISTPD SKKRRAEDES GPQAYALSEG ALTPMTITES QATPASQASS SVKARKGKSE KSGSSQKRKV SKKITSSPKQ
501: EIGTGEATEQ EEGKEQKSGR RTSFGYDQEA RESSGGKNSL PRFMQPTQSA KAKVQEHNSP RSSPDLQERD VVSAKKRHSL PGVTNGKQVS PRIQRSASQA
601: QQGTKDRKWQ R

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.