CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041437_P001	Maize	cytosol, mitochondrion	72.14	75.39
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	43.2	50.25
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	41.68	48.01
Os12t0604500-00	Rice	cytosol	46.0	47.76
GSMUA_Achr3P14930_001	Banana	cytosol	31.53	38.52
KXG40135	Sorghum	cytosol, mitochondrion	33.91	37.74
EER93770	Sorghum	cytosol, mitochondrion	39.74	37.55
GSMUA_Achr8P26800_001	Banana	cytosol	30.02	37.17
OQU91764	Sorghum	mitochondrion, plastid	37.8	34.65
CDY29768	Canola	cytosol	11.88	32.93
CDY50677	Canola	nucleus	26.13	32.88
KRH69109	Soybean	nucleus	29.59	32.85
Bra039715.1-P	Field mustard	nucleus, plastid	25.92	32.43
VIT_05s0020g03980.t01	Wine grape	cytosol	32.4	32.33
KRH35475	Soybean	cytosol	32.61	32.2
CDY36861	Canola	nucleus	25.92	32.09
KRH31669	Soybean	cytosol, mitochondrion	29.16	31.91
KRG91354	Soybean	cytosol, plastid	30.89	30.56
Bra036898.1-P	Field mustard	cytosol	23.54	29.78
CDY64325	Canola	cytosol	23.33	28.95
EES12687	Sorghum	cytosol, mitochondrion	27.43	27.19
VIT_14s0030g01880.t01	Wine grape	nucleus	21.6	25.58
AT4G14750.3	Thale cress	cytosol	25.05	25.22
KRH68719	Soybean	cytosol	19.22	23.8
KRG96957	Soybean	cytosol	18.79	23.51
KXG21487	Sorghum	cytosol, mitochondrion	24.41	22.92
KXG22374	Sorghum	mitochondrion	18.79	21.8
KXG33342	Sorghum	mitochondrion	18.57	21.72
EES02320	Sorghum	mitochondrion	22.46	21.67
EER94844	Sorghum	cytosol	21.17	19.64
OQU93295	Sorghum	plastid	11.02	18.02
KXG30089	Sorghum	cytosol, mitochondrion, plastid	7.99	16.44
KXG22418	Sorghum	cytosol, plastid	17.93	14.34
KXG30090	Sorghum	mitochondrion	9.5	14.29
KXG33252	Sorghum	cytosol	14.69	12.16
EES11606	Sorghum	nucleus	15.55	8.13

Protein Annotations

EnsemblPlants:OQU79535	EnsemblPlantsGene:SORBI_3008G159601	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF37	PFAM:PF00612	PFscan:PS50096
ProteinID:OQU79535	ProteinID:OQU79535.1	SEG:seg	SMART:SM00015	UniParc:UPI000B8BA4F3	UniProt:A0A1Z5R7W1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:59292839..59294455

Molecular Weight (calculated)

48823.1 Da

IEP (calculated)

11.763

GRAVY (calculated)

-0.633

Length

463 amino acids

Sequence
(BLAST)

001: MGKASRWLRN LFLTGWKGRT AKDRGAADVD CQSVLSAPLP SHSLAATATA TPSGREKRRW SFRCPGASGG AQGQGPLASS SSHCFSEAEV HVVVVAQEQD
101: QQQVAAAAAA VVPGTALSSS TAGTRRRSAG GGDRDAAAVR IQAAFRSYLA RKALCALRGM VRLQAMVRGQ LVRRQANLTL RRMQALVHAQ RRARAERLRL
201: LDLEDGASSR QQAATTATTA TPRPPPSRRS PQHPRSRKPP EAAERGSEEN DVRIVEVDDG APRTSARRNS CCHYSTPTTT TPSRTPAKAE PLCQKVSPTP
301: SSARTLSGRF DVDDASFVSA SEPAPVPSRR RAAWRADPPP FFPSYMANTE SSRAKARSQS APRQRLSSAS ETAVPAASPS PSCWDWEHPP TPSLGGGGGG
401: GSARRRASLD LPGGGAPSRH VQRCASRARA STMSSVPGSE CGSSSTVGHR GSARTGHGMG GDY

Best Arabidopsis Sequence Match ( AT4G14750.2 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.