Factsheet for Bra039715.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50677	Canola	nucleus	98.92	99.46
CDY36861	Canola	nucleus	96.49	95.45
Bra036898.1-P	Field mustard	cytosol	77.03	77.87
AT4G14750.3	Thale cress	cytosol	88.38	71.09
GSMUA_Achr3P14930_001	Banana	cytosol	50.81	49.6
GSMUA_Achr8P26800_001	Banana	cytosol	48.11	47.59
Bra012855.1-P	Field mustard	mitochondrion	12.43	44.66
TraesCS5A01G377500.1	Wheat	cytosol	46.22	37.01
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	45.95	36.8
TraesCS5D01G387500.1	Wheat	cytosol	45.68	36.5
HORVU5Hr1G093430.4	Barley	cytosol	45.95	36.32
Zm00001d033280_P001	Maize	cytosol, mitochondrion	44.86	35.1
Os03t0636700-00	Rice	mitochondrion	42.16	34.9
EER93770	Sorghum	cytosol, mitochondrion	44.32	33.47
Bra036812.1-P	Field mustard	mitochondrion	12.97	31.17
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	32.43	30.15
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	32.43	29.85
Os12t0604500-00	Rice	cytosol	35.95	29.82
KRH68719	Soybean	cytosol	29.46	29.14
Bra014304.1-P	Field mustard	cytosol, mitochondrion	22.7	28.97
VIT_14s0030g01880.t01	Wine grape	nucleus	30.54	28.9
KRG96957	Soybean	cytosol	28.65	28.65
Zm00001d041437_P001	Maize	cytosol, mitochondrion	33.78	28.22
Bra030407.1-P	Field mustard	cytosol	24.86	27.3
Bra005929.1-P	Field mustard	plastid	25.14	27.11
Bra001633.1-P	Field mustard	cytosol	26.76	26.54
OQU79535	Sorghum	cytosol, mitochondrion	32.43	25.92
Bra021181.1-P	Field mustard	cytosol	27.03	25.71
Bra022163.1-P	Field mustard	cytosol	26.76	25.58
Bra009281.1-P	Field mustard	mitochondrion	23.78	24.86
Bra024161.1-P	Field mustard	mitochondrion	25.14	23.97
Bra010055.1-P	Field mustard	plastid	25.14	22.96
Bra020822.1-P	Field mustard	mitochondrion, plastid	24.59	21.67
Bra013672.1-P	Field mustard	mitochondrion, nucleus	28.38	21.17
Bra019337.1-P	Field mustard	nucleus	26.76	21.02
Bra023414.1-P	Field mustard	nucleus	20.0	18.73
Bra028807.1-P	Field mustard	mitochondrion	18.38	17.89
Bra009498.1-P	Field mustard	cytosol, mitochondrion	18.11	17.54
Bra006201.1-P	Field mustard	nucleus	20.54	17.0
Bra008163.1-P	Field mustard	cytosol	22.16	15.89
Bra026581.1-P	Field mustard	cytosol	23.78	15.22
Bra024806.1-P	Field mustard	cytosol, plastid	22.43	14.19
Bra025690.1-P	Field mustard	cytosol, mitochondrion	21.35	14.01
Bra017409.1-P	Field mustard	cytosol, plastid	20.81	13.63
Bra016536.1-P	Field mustard	nucleus	22.16	12.18
Bra019653.1-P	Field mustard	cytosol	19.73	11.62
Bra016490.1-P	Field mustard	nucleus	21.08	10.55
Bra025777.1-P	Field mustard	nucleus, plastid	18.92	9.41

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EnsemblPlantsGene:Bra039715	EnsemblPlants:Bra039715.1	EnsemblPlants:Bra039715.1-P	InterPro:DUF4005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4FF43
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF45	SMART:SM00015
UniParc:UPI00025459FF	SEG:seg	:	:	:	:

Description

AT4G14750 (E=3e-146) IQD19 | IQD19 (IQ-domain 19); calmodulin binding

Coordinates

chrA08:+:6479033..6480327

Molecular Weight (calculated)

41744.3 Da

IEP (calculated)

10.568

GRAVY (calculated)

-0.895

Length

370 amino acids

Sequence
(BLAST)

001: MGKTSKWIRN FLTGKKERTK EKINQSERGF TSTTPGTPKE KRRWSFRRSS ATAPPTCAST LKDSSPPPQP PPPPQPFVVD SEDEQSKNVS APEIAVAVED
101: FAAVKIQACF RSHLARKALR ALKGLVKLQA LVRGHLVRKQ ATATLRCMQA LITLQAKARE QRIRMIGDSP TNPRTSNHKT RIHNIYHENE ENIKIVEMDT
201: QSKFYSPAPS AITDMSPRAY SSHFEDCNSF NTAQSSPQCS RFREYYNGDS LSSYDYPLFP NYMANTQSSK AKARSQSAPK QRPPEIYEKQ PSGRRRSSME
301: APRNGVPRAV RMQRSSSQLG KESQSHHHHH HPWMAIKLDR SNISLMESEC GSTSTIMTNS NYGRHVDVSL

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.