Factsheet for TraesCS5A01G055100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	90.55	91.46
Os12t0604500-00	Rice	cytosol	56.97	51.35
Zm00001d041437_P001	Maize	cytosol, mitochondrion	48.76	44.24
OQU79535	Sorghum	cytosol, mitochondrion	48.01	41.68
CDY29768	Canola	cytosol	15.42	37.13
GSMUA_Achr3P14930_001	Banana	cytosol	34.83	36.94
TraesCS5A01G377500.1	Wheat	cytosol	41.79	36.36
GSMUA_Achr8P26800_001	Banana	cytosol	32.84	35.29
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	36.82	34.1
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	37.56	33.19
CDY50677	Canola	nucleus	29.85	32.61
Bra039715.1-P	Field mustard	nucleus, plastid	29.85	32.43
CDY36861	Canola	nucleus	30.1	32.35
KRH69109	Soybean	nucleus	33.33	32.13
VIT_05s0020g03980.t01	Wine grape	cytosol	36.57	31.68
KRH31669	Soybean	cytosol, mitochondrion	33.08	31.44
Bra036898.1-P	Field mustard	cytosol	28.36	31.15
KRG91354	Soybean	cytosol, plastid	35.32	30.34
KRH35475	Soybean	cytosol	35.32	30.28
CDY64325	Canola	cytosol	27.36	29.49
AT4G14750.3	Thale cress	cytosol	29.35	25.65
TraesCS1A01G341900.1	Wheat	cytosol	21.64	24.93
VIT_14s0030g01880.t01	Wine grape	nucleus	23.88	24.55
KRH68719	Soybean	cytosol	21.64	23.26
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	26.62	22.91
KRG96957	Soybean	cytosol	20.9	22.7
TraesCS3A01G275900.1	Wheat	mitochondrion	20.65	22.19
TraesCS1A01G122900.1	Wheat	cytosol, plastid	24.38	21.59
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	19.4	17.61
TraesCS5A01G163000.1	Wheat	nucleus	20.65	17.44
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	20.15	13.99
TraesCS3A01G244100.1	Wheat	cytosol, plastid	16.92	12.41
TraesCS5A01G502100.1	Wheat	cytosol, plastid	10.95	11.46
TraesCS2A01G492300.1	Wheat	nucleus	17.66	8.25

Protein Annotations

EnsemblPlants:TraesCS5A01G055100.1	EnsemblPlantsGene:TraesCS5A01G055100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF37	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5A:-:51736743..51738052

Molecular Weight (calculated)

42508.8 Da

IEP (calculated)

11.417

GRAVY (calculated)

-0.650

Length

402 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS FLTGKKARDK GADDGLPAPA AKERRRWSFR RPAASASARD TSSATSGCHG KGQLASTSSH CFLEVHAVTV QDQHAVGAAA PHEVAITAAT
101: APPEGSARDA EEAAAVKIQA AFRSYLARTA LCALRGMVKL QAIVRGQLVR RQADMTLRRI QALVAAQRRV RAERLRLRLL DDGTPPARTS RRSPQHHCSP
201: RKPLSAAMQE QNGEMDSGGG GGARRNSCCS TPAKAELYYN QNQKASPGPP GLTSDLSVRT FSDRFDEEHY SAASFSAAGS EASGRHRGKA CHAHAASYMA
301: NTESSRAKQA RSQSAPRHRP EAASPSRSYE RPPSGGGGRR RASLDPRDLA GQVRAPSPRS SVEAGRVTPH DRPGASLAGS ECGSSSSTAL LLASAAAARI
401: AR

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.