Factsheet for TraesCSU01G074100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	91.46	90.55
Os12t0604500-00	Rice	cytosol	57.04	50.9
Zm00001d041437_P001	Maize	cytosol, mitochondrion	50.75	45.6
OQU79535	Sorghum	cytosol, mitochondrion	50.25	43.2
GSMUA_Achr3P14930_001	Banana	cytosol	36.43	38.26
GSMUA_Achr8P26800_001	Banana	cytosol	34.92	37.17
CDY29768	Canola	cytosol	15.33	36.53
KRH69109	Soybean	nucleus	35.43	33.81
KRH31669	Soybean	cytosol, mitochondrion	35.18	33.1
CDY50677	Canola	nucleus	30.15	32.61
VIT_05s0020g03980.t01	Wine grape	cytosol	37.94	32.54
Bra039715.1-P	Field mustard	nucleus, plastid	30.15	32.43
CDY36861	Canola	nucleus	30.4	32.35
KRG91354	Soybean	cytosol, plastid	37.19	31.62
KRH35475	Soybean	cytosol	36.93	31.34
Bra036898.1-P	Field mustard	cytosol	28.64	31.15
CDY64325	Canola	cytosol	27.64	29.49
AT4G14750.3	Thale cress	cytosol	29.9	25.87
VIT_14s0030g01880.t01	Wine grape	nucleus	24.37	24.81
KRH68719	Soybean	cytosol	22.61	24.06
KRG96957	Soybean	cytosol	22.11	23.78

Protein Annotations

EnsemblPlants:TraesCSU01G074100.1	EnsemblPlantsGene:TraesCSU01G074100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF37	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrUn:-:65960963..65962579

Molecular Weight (calculated)

42131.5 Da

IEP (calculated)

11.587

GRAVY (calculated)

-0.617

Length

398 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS FLTGKKAKDR GADEPAAKEK RRWSFRRPAA SVSARDTSSA TSGCHGKGQL ASASSHCFSE VHVVTVQDQH AVGAAPRVVA ITAATAPPEG
101: SARDAEEAAA VKIQSAFRSY LARTALCALR GMVKLQAIVR GQLVRRQADM TLRRIQALVA AQRRARAERL RLRLLDDGTP PARTGRRSPQ HHCSPRKPLS
201: VAMQEESGKG IGEVDSGGGA RRNSCCSTPA KAELYYNQKA SPGPSGLTSD LSVRTFSGRF DEEHYSSASF SAAASEASGR HRGGKACHAH AASYMANTES
301: SRAKHARSQS APRHRPEAAS PSRSYERPPS GGGGRRRASL DPRDLAGQVR APSPRSSVDA GRVTPQDRPG ASLAVSERGS SSSTALLLTS AAAVRIAK

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.