Factsheet for Bra028807.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72577	Canola	cytosol, mitochondrion	74.21	97.24
Bra009498.1-P	Field mustard	cytosol, mitochondrion	84.74	84.29
CDY04907	Canola	endoplasmic reticulum	74.21	84.18
CDY14162	Canola	endoplasmic reticulum	74.21	84.18
CDY41417	Canola	mitochondrion	57.63	73.24
KRH33197	Soybean	cytosol, mitochondrion	43.68	42.56
VIT_08s0007g05960.t01	Wine grape	cytosol	44.47	39.76
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	41.32	38.77
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	40.53	37.56
VIT_08s0007g05980.t01	Wine grape	cytosol	40.0	33.63
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	37.11	33.49
Bra012855.1-P	Field mustard	mitochondrion	8.95	33.01
Bra023414.1-P	Field mustard	nucleus	29.74	28.61
GSMUA_Achr3P17450_001	Banana	nucleus	32.11	27.17
Bra014304.1-P	Field mustard	cytosol, mitochondrion	20.0	26.21
Bra005929.1-P	Field mustard	plastid	23.42	25.95
PGSC0003DMT400021096	Potato	nucleus	15.0	25.79
Bra009281.1-P	Field mustard	mitochondrion	23.95	25.71
Bra006201.1-P	Field mustard	nucleus	29.74	25.28
TraesCS5A01G163000.1	Wheat	nucleus	30.53	24.37
Os03t0355700-00	Rice	cytosol	28.68	24.17
TraesCS5B01G160400.1	Wheat	cytosol	30.26	24.16
TraesCS5D01G168000.2	Wheat	nucleus	30.26	23.96
Bra010055.1-P	Field mustard	plastid	25.26	23.7
Zm00001d029197_P001	Maize	nucleus	29.21	23.32
EER94844	Sorghum	cytosol	30.53	23.25
Bra001633.1-P	Field mustard	cytosol	22.63	23.06
Bra030407.1-P	Field mustard	cytosol	20.26	22.85
Bra036812.1-P	Field mustard	mitochondrion	9.21	22.73
Bra022163.1-P	Field mustard	cytosol	22.89	22.48
Bra021181.1-P	Field mustard	cytosol	22.63	22.11
Bra024161.1-P	Field mustard	mitochondrion	20.79	20.36
HORVU5Hr1G050840.5	Barley	cytosol, plastid	29.21	19.96
Bra020822.1-P	Field mustard	mitochondrion, plastid	20.79	18.81
Bra013672.1-P	Field mustard	mitochondrion, nucleus	24.47	18.75
Bra039715.1-P	Field mustard	nucleus, plastid	17.89	18.38
Bra036898.1-P	Field mustard	cytosol	17.63	18.31
Bra019337.1-P	Field mustard	nucleus	21.58	17.41
Bra025690.1-P	Field mustard	cytosol, mitochondrion	17.11	11.52
Bra008163.1-P	Field mustard	cytosol	15.26	11.24
Bra026581.1-P	Field mustard	cytosol	16.58	10.9
Bra024806.1-P	Field mustard	cytosol, plastid	15.26	9.91
Bra017409.1-P	Field mustard	cytosol, plastid	14.47	9.73
Bra019653.1-P	Field mustard	cytosol	16.05	9.71
Bra016536.1-P	Field mustard	nucleus	16.32	9.21
Bra016490.1-P	Field mustard	nucleus	15.26	7.85
Bra025777.1-P	Field mustard	nucleus, plastid	15.26	7.8

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EnsemblPlantsGene:Bra028807	EnsemblPlants:Bra028807.1	EnsemblPlants:Bra028807.1-P	InterPro:DUF4005
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M4EJ42
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41	SMART:SM00015
UniParc:UPI0002543091	SEG:seg	:	:	:	:

Description

AT5G03960 (E=7e-118) IQD12 | IQD12 (IQ-domain 12); calmodulin binding

Coordinates

chrA02:-:1954920..1956504

Molecular Weight (calculated)

43809.0 Da

IEP (calculated)

11.417

GRAVY (calculated)

-0.649

Length

380 amino acids

Sequence
(BLAST)

001: MAKRRSWFGW IKRLFTCEAK AKAEKKSRRL RWMFRRLKLR HQISTRVQET RTLNQATEDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKRDTNLA AIKIQSAFRA YLARKALRAL KALVKLQAIV RGRAVRRSVS TLLKTKPSNK ASASSLITRT TEGKHWSKIK EELKVKCNGQ NVWDSSALTK
201: EDIKAIWLWK QEGVVMRERM LKYSRSHRER RSPHMLLESL HTKDMRMRSC RLEHWGESKS LIPNEILVPT KVKLRTLQRQ DSSDGQESPF FFPRRSFSRL
301: EQSLLEDESW YQSFKGFQPY MSVTESAKEK FRSLSTPRQR IGVMDTWLDK KDGDKVSLWS SFVSETSKMS SSKKSSLAHS

Best Arabidopsis Sequence Match ( AT5G03960.3 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.