Factsheet for Bra009498.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70272	Canola	cytosol, mitochondrion	75.92	98.98
CDY41423	Canola	cytosol, mitochondrion	73.56	95.9
Bra028807.1-P	Field mustard	mitochondrion	84.29	84.74
AT5G03960.2	Thale cress	cytosol, mitochondrion	81.68	77.23
KRH33197	Soybean	cytosol, mitochondrion	43.46	42.56
VIT_08s0007g05960.t01	Wine grape	cytosol	45.29	40.71
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	41.1	38.77
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	40.58	37.8
VIT_08s0007g05980.t01	Wine grape	cytosol	41.62	35.18
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	36.39	33.02
Bra012855.1-P	Field mustard	mitochondrion	8.12	30.1
GSMUA_Achr3P17450_001	Banana	nucleus	32.2	27.39
PGSC0003DMT400021096	Potato	nucleus	15.45	26.7
Bra014304.1-P	Field mustard	cytosol, mitochondrion	19.63	25.86
Bra023414.1-P	Field mustard	nucleus	26.44	25.57
Bra005929.1-P	Field mustard	plastid	22.51	25.07
TraesCS5B01G160400.1	Wheat	cytosol	30.89	24.79
TraesCS5A01G163000.1	Wheat	nucleus	30.89	24.79
Bra009281.1-P	Field mustard	mitochondrion	22.77	24.58
TraesCS5D01G168000.2	Wheat	nucleus	30.63	24.38
Zm00001d029197_P001	Maize	nucleus	29.84	23.95
Bra006201.1-P	Field mustard	nucleus	28.01	23.94
Os03t0355700-00	Rice	cytosol	28.01	23.73
EER94844	Sorghum	cytosol	30.89	23.65
Bra010055.1-P	Field mustard	plastid	24.35	22.96
Bra030407.1-P	Field mustard	cytosol	19.9	22.55
Bra001633.1-P	Field mustard	cytosol	21.73	22.25
Bra022163.1-P	Field mustard	cytosol	21.2	20.93
Bra021181.1-P	Field mustard	cytosol	21.2	20.82
HORVU5Hr1G050840.5	Barley	cytosol, plastid	29.84	20.5
Bra036812.1-P	Field mustard	mitochondrion	8.12	20.13
Bra024161.1-P	Field mustard	mitochondrion	20.42	20.1
Bra013672.1-P	Field mustard	mitochondrion, nucleus	24.61	18.95
Bra020822.1-P	Field mustard	mitochondrion, plastid	20.42	18.57
Bra039715.1-P	Field mustard	nucleus, plastid	17.54	18.11
Bra036898.1-P	Field mustard	cytosol	17.02	17.76
Bra019337.1-P	Field mustard	nucleus	21.73	17.62
Bra025690.1-P	Field mustard	cytosol, mitochondrion	16.75	11.35
Bra026581.1-P	Field mustard	cytosol	16.49	10.9
Bra008163.1-P	Field mustard	cytosol	14.4	10.66
Bra019653.1-P	Field mustard	cytosol	16.75	10.19
Bra024806.1-P	Field mustard	cytosol, plastid	14.92	9.74
Bra017409.1-P	Field mustard	cytosol, plastid	14.14	9.56
Bra016536.1-P	Field mustard	nucleus	16.23	9.21
Bra016490.1-P	Field mustard	nucleus	15.18	7.85
Bra025777.1-P	Field mustard	nucleus, plastid	14.92	7.66

Protein Annotations

EnsemblPlants:Bra009498.1	EnsemblPlants:Bra009498.1-P	EnsemblPlantsGene:Bra009498	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	UniParc:UPI0002547A6A	UniProt:M4CZ51
MapMan:35.2	:	:	:	:	:

Description

AT5G03960 (E=2e-126) IQD12 | IQD12 (IQ-domain 12); calmodulin binding

Coordinates

chrA10:+:16930028..16931498

Molecular Weight (calculated)

43864.9 Da

IEP (calculated)

11.250

GRAVY (calculated)

-0.718

Length

382 amino acids

Sequence
(BLAST)

001: MAKRRSWFGW IKRLFICEAK AKSEKPRRLR WVFRRLKLRH QIATPAQETR TLNKATEDQR KHAMNVAIAT AAAAEAAVAA AKAAAEVVRM AENAFTSQHF
101: VKKSSDPNLA AIKIQSAFRA YLARKALRAL KALVRLQAIV RGRAVRRKVS SNKASTSSLI QRKHLSKNKT EIKEELKIPK RSMCNGQNSW DSSALTKEDI
201: KAIWLRKQEG AVKRERMLKY SRSHRERRSP HMLLESLYTK DMGMRSCRLE HWGESKSEMV VVPTKVKLRS LQRQDSGDGQ DSPFSFPRRS FSRLEQSLLE
301: DESWFQSGFQ PYMSVTESAK EKFRSLSTPR QRAAVMESWL DENKKDGDKV SLWSSFVSEE NSKMSSSKKS SLATNKHLLL KY

Best Arabidopsis Sequence Match ( AT5G03960.1 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKPRRLR WVFKRLKLRP QLATCGQETR TLNEATQDQR KHAMNVAIAT AAAAEAAVAA AKAAAEVVRM AGNAFTSQHF
101: VKKLAPNVAA IKIQSAFRAS LARKALRALK ALVRLQAIVR GRAVRRKVSA LLKSSHSNKA STSNIIQRQT ERKHWSNTKS EIKEELQVSN HSLCNSKVKC
201: NGWDSSALTK EDIKAIWLRK QEGVIKRDRM LKYSRSQRER RSPHMLVESL YAKDMGMRSC RLEHWGESKS AKSINSFLIP SEMLVPTKVK LRSLQRQDSG
301: DGQDSPFSFP RRSFSRLEQS ILEDESWFQR SNGFQPYMSV TESAREKMRS LSTPRQRVGI MDSLFDNYKK DGDKVSLWST FVCENSKINN AKKSSLTTYQ
401: HNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.