Factsheet for Bra001633.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82400	Canola	cytosol	99.73	99.73
Bra021181.1-P	Field mustard	cytosol	84.18	80.72
AT3G16490.1	Thale cress	cytosol	83.91	80.46
Bra022163.1-P	Field mustard	cytosol	83.11	80.1
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	57.91	53.73
Solyc06g066430.2.1	Tomato	nucleus	55.76	53.06
KRH47199	Soybean	cytosol	55.76	52.53
KRH44268	Soybean	cytosol	54.96	50.99
Bra014304.1-P	Field mustard	cytosol, mitochondrion	39.41	50.69
PGSC0003DMT400042595	Potato	nucleus	19.3	47.37
Bra030407.1-P	Field mustard	cytosol	40.48	44.81
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	40.75	40.53
Bra012855.1-P	Field mustard	mitochondrion	10.99	39.81
TraesCS1D01G123800.1	Wheat	cytosol	47.72	39.21
TraesCS1B01G142100.1	Wheat	cytosol	47.72	39.21
GSMUA_Achr10P...	Banana	cytosol	46.11	39.0
TraesCS1A01G122900.1	Wheat	cytosol, plastid	47.45	38.99
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	41.82	38.42
Os05t0187500-01	Rice	cytosol	48.26	38.3
GSMUA_AchrUn_...	Banana	cytosol	38.87	38.26
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	47.19	38.18
TraesCS3B01G127100.1	Wheat	cytosol	47.19	38.01
Bra024161.1-P	Field mustard	mitochondrion	39.41	37.89
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	47.19	37.69
Os01t0190500-01	Rice	cytosol, mitochondrion	46.92	37.63
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	37.8	37.4
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	40.48	37.38
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	36.73	37.13
Zm00001d037688_P001	Maize	mitochondrion	45.84	37.01
EES02320	Sorghum	mitochondrion	47.45	36.88
Zm00001d010366_P001	Maize	cytosol, mitochondrion	45.84	36.46
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	38.07	35.5
KXG21487	Sorghum	cytosol, mitochondrion	46.92	35.5
Zm00001d039510_P001	Maize	cytosol, mitochondrion	45.58	35.34
Zm00001d008819_P001	Maize	mitochondrion	43.7	34.98
HORVU1Hr1G028250.6	Barley	mitochondrion	47.99	33.97
Bra005929.1-P	Field mustard	plastid	29.22	31.78
Bra009281.1-P	Field mustard	mitochondrion	28.95	30.51
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	46.38	30.19
Bra010055.1-P	Field mustard	plastid	31.37	28.89
Bra039715.1-P	Field mustard	nucleus, plastid	26.54	26.76
Bra036812.1-P	Field mustard	mitochondrion	10.72	25.97
Bra036898.1-P	Field mustard	cytosol	24.93	25.41
Bra013672.1-P	Field mustard	mitochondrion, nucleus	33.51	25.2
Bra020822.1-P	Field mustard	mitochondrion, plastid	27.08	24.05
Bra019337.1-P	Field mustard	nucleus	29.49	23.35
Bra028807.1-P	Field mustard	mitochondrion	23.06	22.63
Bra009498.1-P	Field mustard	cytosol, mitochondrion	22.25	21.73
Bra023414.1-P	Field mustard	nucleus	20.38	19.24
Bra006201.1-P	Field mustard	nucleus	20.64	17.23
Bra008163.1-P	Field mustard	cytosol	19.3	13.95
Bra025690.1-P	Field mustard	cytosol, mitochondrion	19.3	12.77
Bra026581.1-P	Field mustard	cytosol	17.69	11.42
Bra016536.1-P	Field mustard	nucleus	20.38	11.29
Bra017409.1-P	Field mustard	cytosol, plastid	16.35	10.8
Bra024806.1-P	Field mustard	cytosol, plastid	16.89	10.77
Bra019653.1-P	Field mustard	cytosol	16.09	9.55
Bra016490.1-P	Field mustard	nucleus	18.77	9.47
Bra025777.1-P	Field mustard	nucleus, plastid	18.23	9.14

Protein Annotations

EnsemblPlants:Bra001633.1	EnsemblPlants:Bra001633.1-P	EnsemblPlantsGene:Bra001633	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002540AC7
UniProt:M4CBQ3	MapMan:35.2	:	:	:	:

Description

AT3G16490 (E=5e-147) IQD26 | IQD26 (IQ-domain 26); calmodulin binding

Coordinates

chrA03:-:17572927..17574320

Molecular Weight (calculated)

41915.6 Da

IEP (calculated)

10.584

GRAVY (calculated)

-0.737

Length

373 amino acids

Sequence
(BLAST)

001: MGRASRWFKG IFGMKKRKEK ESGVPGDGGG ETGRSHIYGK TFQADSVWLR TYLAETDIEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRGGGY
101: SGTTMERWAA VKIQTIFKGY LARKALRALK GLVKLQALVR GYLVRKCAAE TFHSMQALIR AQTSVRSQRI NRNNILHPRH SLEKSDDSRS DIHSKRISVS
201: VEKHSNNNTY NETSPKIVEI DTYKTKSRSR RLNVDVSEHE DDIEWSFPGD KCKFPTAQNT PRFYSSAVNN HHYYYTPPSP AKSVCRDPYF RPSHPGLMSP
301: SYMANTQSFK AKVRSHSAPR QRPDKKKLSL EEIMAARSSV SGVRMAQPQQ EKRSSCSYDR QFPQERVDFR YYN

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.