Factsheet for Bra022163.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92076	Canola	cytosol	99.48	99.48
AT3G16490.1	Thale cress	cytosol	87.34	86.89
Bra021181.1-P	Field mustard	cytosol	87.08	86.63
Bra001633.1-P	Field mustard	cytosol	80.1	83.11
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	56.59	54.48
Solyc06g066430.2.1	Tomato	nucleus	54.52	53.83
KRH47199	Soybean	cytosol	54.26	53.03
Bra014304.1-P	Field mustard	cytosol, mitochondrion	39.02	52.07
KRH44268	Soybean	cytosol	53.23	51.24
PGSC0003DMT400042595	Potato	nucleus	18.6	47.37
Bra030407.1-P	Field mustard	cytosol	39.79	45.7
TraesCS1B01G142100.1	Wheat	cytosol	47.55	40.53
TraesCS1D01G123800.1	Wheat	cytosol	47.55	40.53
GSMUA_Achr10P...	Banana	cytosol	45.99	40.36
TraesCS1A01G122900.1	Wheat	cytosol, plastid	47.29	40.31
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	39.02	40.27
Bra012855.1-P	Field mustard	mitochondrion	10.59	39.81
Bra024161.1-P	Field mustard	mitochondrion	39.79	39.69
Os05t0187500-01	Rice	cytosol	47.8	39.36
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	46.77	39.26
TraesCS3B01G127100.1	Wheat	cytosol	46.77	39.09
Os01t0190500-01	Rice	cytosol, mitochondrion	46.77	38.92
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	46.77	38.76
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	40.57	38.67
Zm00001d037688_P001	Maize	mitochondrion	45.99	38.53
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	36.43	38.21
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	39.79	38.12
EES02320	Sorghum	mitochondrion	47.03	37.92
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	36.69	37.67
Zm00001d010366_P001	Maize	cytosol, mitochondrion	45.48	37.53
GSMUA_AchrUn_...	Banana	cytosol	36.69	37.47
KXG21487	Sorghum	cytosol, mitochondrion	46.25	36.31
Zm00001d039510_P001	Maize	cytosol, mitochondrion	44.7	35.97
Zm00001d008819_P001	Maize	mitochondrion	42.89	35.62
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	36.18	35.0
HORVU1Hr1G028250.6	Barley	mitochondrion	47.55	34.91
Bra005929.1-P	Field mustard	plastid	28.68	32.36
Bra009281.1-P	Field mustard	mitochondrion	28.68	31.36
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	45.99	31.06
Bra010055.1-P	Field mustard	plastid	30.23	28.89
Bra039715.1-P	Field mustard	nucleus, plastid	25.58	26.76
Bra013672.1-P	Field mustard	mitochondrion, nucleus	34.11	26.61
Bra036812.1-P	Field mustard	mitochondrion	10.34	25.97
Bra019337.1-P	Field mustard	nucleus	30.75	25.27
Bra020822.1-P	Field mustard	mitochondrion, plastid	27.13	25.0
Bra036898.1-P	Field mustard	cytosol	23.51	24.86
Bra028807.1-P	Field mustard	mitochondrion	22.48	22.89
Bra009498.1-P	Field mustard	cytosol, mitochondrion	20.93	21.2
Bra023414.1-P	Field mustard	nucleus	19.64	19.24
Bra006201.1-P	Field mustard	nucleus	19.9	17.23
Bra008163.1-P	Field mustard	cytosol	18.86	14.15
Bra025690.1-P	Field mustard	cytosol, mitochondrion	19.12	13.12
Bra016536.1-P	Field mustard	nucleus	19.9	11.44
Bra026581.1-P	Field mustard	cytosol	17.05	11.42
Bra017409.1-P	Field mustard	cytosol, plastid	15.76	10.8
Bra024806.1-P	Field mustard	cytosol, plastid	16.28	10.77
Bra019653.1-P	Field mustard	cytosol	15.5	9.55
Bra016490.1-P	Field mustard	nucleus	17.31	9.07
Bra025777.1-P	Field mustard	nucleus, plastid	17.31	9.01

Protein Annotations

EnsemblPlants:Bra022163.1	EnsemblPlants:Bra022163.1-P	EnsemblPlantsGene:Bra022163	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF10	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	UniParc:UPI000254773A	UniProt:M4E066	MapMan:35.2	:	:

Description

AT3G16490 (E=1e-155) IQD26 | IQD26 (IQ-domain 26); calmodulin binding

Coordinates

chrA05:+:19401920..19403364

Molecular Weight (calculated)

43655.0 Da

IEP (calculated)

10.706

GRAVY (calculated)

-0.666

Length

387 amino acids

Sequence
(BLAST)

001: MGRAVRWFKG IFGMKNSKEK EYRVSGDGRG EAGESLIHRK ILQADNVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNAKTGGR
101: SGGNVVYGTT MERWAAVKIQ SVFKGYLARK ALRALKGLVK LQALVRGYLV RKRAAETLYS MQALIRAQTS VRSQRINRNN MLHPRHSLER FDDSRSEIHS
201: KRMSISVEKH INNNIYDETS PKIVEIDTYK TKSRSRRMNV AVSECGDEDF EWSFRGEKCK FPTAQNTPRF SSSAAMNNNY YYTPPSPAKS VCRDACYKPS
301: YPGLMTPSYM ANTQSFRAKA RSHSAPRQRP DRKRLSLDEI MAARSSVSGV RMVQPQPQLL QQQQEKRSSC NYDRQFPQEP VGFRFYN

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.