CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037688_P001	Maize	mitochondrion	83.37	88.96
Os05t0187500-01	Rice	cytosol	73.23	76.81
TraesCS1D01G123800.1	Wheat	cytosol	70.39	76.43
TraesCS1B01G142100.1	Wheat	cytosol	70.39	76.43
TraesCS1A01G122900.1	Wheat	cytosol, plastid	70.18	76.21
HORVU1Hr1G028250.6	Barley	mitochondrion	69.98	65.46
EES02320	Sorghum	mitochondrion	62.88	64.58
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	43.41	57.07
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	46.25	56.44
GSMUA_Achr10P...	Banana	cytosol	49.49	55.33
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	43.61	53.48
KRH48993	Soybean	plastid	10.14	53.19
KRH47199	Soybean	cytosol	42.6	53.03
VIT_11s0016g03030.t01	Wine grape	cytosol	46.04	52.18
KRH44268	Soybean	cytosol	42.39	51.99
GSMUA_AchrUn_...	Banana	cytosol	39.96	51.98
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	42.6	51.72
Solyc06g066430.2.1	Tomato	nucleus	40.16	50.51
KRH74242	Soybean	cytosol, mitochondrion	42.19	49.52
KRH60203	Soybean	cytosol, mitochondrion	35.5	48.61
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	39.35	48.5
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	36.92	48.28
CDY68636	Canola	cytosol	37.93	48.07
KRH41488	Soybean	cytosol, mitochondrion	42.39	47.94
Bra021181.1-P	Field mustard	cytosol	37.73	47.81
CDY43103	Canola	cytosol	35.5	47.55
AT3G16490.1	Thale cress	cytosol	37.32	47.3
CDX75883	Canola	cytosol	35.9	47.2
Solyc12g008520.1.1	Tomato	cytosol	39.15	47.19
Bra001633.1-P	Field mustard	cytosol	35.5	46.92
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.09	46.88
CDY67178	Canola	cytosol, mitochondrion	36.71	46.65
CDX82400	Canola	cytosol	35.29	46.65
Bra022163.1-P	Field mustard	cytosol	36.31	46.25
CDX92076	Canola	cytosol	36.31	46.25
PGSC0003DMT400000953	Potato	cytosol	31.44	42.58
CDY46537	Canola	cytosol, mitochondrion	24.75	42.07
Bra014304.1-P	Field mustard	cytosol, mitochondrion	24.75	42.07
KRH48992	Soybean	endoplasmic reticulum	28.8	42.01
CDY30233	Canola	mitochondrion	33.06	42.01
Bra024161.1-P	Field mustard	mitochondrion	33.06	42.01
AT1G51960.1	Thale cress	cytosol, mitochondrion	29.82	41.88
CDY53440	Canola	mitochondrion	24.54	41.72
AT4G29150.1	Thale cress	mitochondrion	33.67	41.6
CDY47784	Canola	mitochondrion	32.25	40.98
CDY45643	Canola	cytosol	26.37	39.88
Bra030407.1-P	Field mustard	cytosol	26.57	38.87
PGSC0003DMT400042595	Potato	nucleus	11.97	38.82
KRH23382	Soybean	cytosol	28.19	36.58
KRH09951	Soybean	cytosol	27.79	36.24
KXG40135	Sorghum	cytosol, mitochondrion	27.99	33.17
EES12687	Sorghum	cytosol, mitochondrion	30.63	32.33
KXG22374	Sorghum	mitochondrion	23.73	29.32
EER93770	Sorghum	cytosol, mitochondrion	28.4	28.57
OQU91764	Sorghum	mitochondrion, plastid	29.21	28.51
KXG33342	Sorghum	mitochondrion	22.11	27.53
EER94844	Sorghum	cytosol	26.17	25.85
OQU79535	Sorghum	cytosol, mitochondrion	22.92	24.41
KXG30089	Sorghum	cytosol, mitochondrion, plastid	9.33	20.44
OQU93295	Sorghum	plastid	11.36	19.79
KXG22418	Sorghum	cytosol, plastid	19.07	16.23
KXG33252	Sorghum	cytosol	16.02	14.13
KXG30090	Sorghum	mitochondrion	8.32	13.31
EES11606	Sorghum	nucleus	17.65	9.82

Protein Annotations

EnsemblPlants:KXG21487	EnsemblPlantsGene:SORBI_3009G070000	EntrezGene:8055700	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KXG21487	ProteinID:KXG21487.2	RefSeq:XP_002439404.1
SEG:seg	SMART:SM00015	UniParc:UPI0001A8894A	UniProt:A0A1B6P708	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:+:8184500..8186318

Molecular Weight (calculated)

51767.1 Da

IEP (calculated)

11.368

GRAVY (calculated)

-0.426

Length

493 amino acids

Sequence
(BLAST)

001: MGKAARWFRS FLGGKKEQQA TKDHRRRQQQ QQQDQPPPPP PPPATTAKRW SFGKSSRDSA EAAAAVVSAG AGNAAIARAA EAAWLRSAAC AETDREREQS
101: KHAIAVAAAT AAAADAAVAA AQAAVAVVRL TNKGRAPPGV LATAGGGRAA AAAVRIQTAF RGFLAKKALR ALKALVKLQA LVRGYLVRRQ AAATLQSMQA
201: LVRAQAAVRA RRAAAAALSQ SHLHHHHHPP PVRPRYSLQE RYADDTRSEH GVAAYSSRRL SASVESSSYG GYDRSPKIVE VDPGRPKSRS SSSRRASSPL
301: LDAAGGSSGG EDWCAANPAS SSPLPCYLSA AGGPPRIAVP TSRQFPDYDW CALEKARPAT AQSTPRYLLP ATPTKSVAGN SPSLHGCPNY MSSTQASEAK
401: VRSQSAPKQR PELACCAGGG GGGARKRVPL SEVVVVESSR ASLSGVVGMQ RGCGGARAQE AFSFRAAVVG RMDRSLEVAG IENDRQAFLQ RRW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.