Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68636 | Canola | cytosol | 94.85 | 94.6 |
| AT3G16490.1 | Thale cress | cytosol | 88.4 | 88.17 |
| CDY43103 | Canola | cytosol | 80.93 | 85.33 |
| CDX75883 | Canola | cytosol | 81.96 | 84.8 |
| CDX92076 | Canola | cytosol | 84.54 | 84.75 |
| CDX82400 | Canola | cytosol | 79.9 | 83.11 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 56.96 | 54.98 |
| KRH47199 | Soybean | cytosol | 54.9 | 53.79 |
| Solyc06g066430.2.1 | Tomato | nucleus | 53.87 | 53.32 |
| KRH44268 | Soybean | cytosol | 53.87 | 51.99 |
| CDY46537 | Canola | cytosol, mitochondrion | 38.4 | 51.38 |
| CDY53440 | Canola | mitochondrion | 38.14 | 51.03 |
| PGSC0003DMT400042595 | Potato | nucleus | 18.56 | 47.37 |
| CDY45643 | Canola | cytosol | 39.69 | 47.24 |
| CDX90650 | Canola | mitochondrion | 11.08 | 41.75 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 39.69 | 41.07 |
| CDY29016 | Canola | mitochondrion | 10.82 | 40.78 |
| GSMUA_Achr10P... | Banana | cytosol | 45.36 | 39.91 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 46.65 | 39.87 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 46.65 | 39.87 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 46.39 | 39.65 |
| CDY30233 | Canola | mitochondrion | 38.92 | 38.92 |
| Os05t0187500-01 | Rice | cytosol | 46.91 | 38.72 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 39.95 | 38.37 |
| Zm00001d037688_P001 | Maize | mitochondrion | 45.62 | 38.31 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 39.95 | 38.18 |
| CDY47784 | Canola | mitochondrion | 38.14 | 38.14 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 45.62 | 38.06 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 45.1 | 37.96 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 45.1 | 37.8 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 45.1 | 37.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.6 | 37.47 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 45.1 | 37.31 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 36.08 | 37.14 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 35.31 | 37.13 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 46.65 | 36.71 |
| EES02320 | Sorghum | mitochondrion | 45.36 | 36.67 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 36.6 | 35.5 |
| Zm00001d008819_P001 | Maize | mitochondrion | 42.27 | 35.19 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 43.3 | 34.93 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 46.65 | 34.35 |
| CDX73724 | Canola | mitochondrion | 10.57 | 31.54 |
| CDX78285 | Canola | plastid | 27.84 | 31.4 |
| CDX70019 | Canola | cytosol, mitochondrion | 27.58 | 30.23 |
| CDX98994 | Canola | mitochondrion | 27.58 | 30.23 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 44.33 | 30.02 |
| CDY29768 | Canola | cytosol | 12.63 | 29.34 |
| CDY00253 | Canola | plastid | 29.38 | 28.93 |
| CDX86928 | Canola | mitochondrion, plastid | 29.12 | 28.68 |
| CDY00251 | Canola | plastid | 29.38 | 27.74 |
| CDX81042 | Canola | plastid | 27.58 | 27.65 |
| CDX78003 | Canola | mitochondrion | 10.82 | 27.63 |
| CDY50677 | Canola | nucleus | 25.52 | 26.9 |
| CDY36861 | Canola | nucleus | 25.52 | 26.47 |
| CDY41252 | Canola | cytosol, mitochondrion | 33.25 | 26.43 |
| CDY53133 | Canola | nucleus | 32.73 | 26.13 |
| CDY41368 | Canola | mitochondrion, plastid | 28.09 | 25.95 |
| CDX70272 | Canola | cytosol, mitochondrion | 19.07 | 25.26 |
| CDX98786 | Canola | nucleus | 30.67 | 25.05 |
| CDY41423 | Canola | cytosol, mitochondrion | 18.81 | 24.91 |
| CDY64325 | Canola | cytosol | 23.71 | 24.66 |
| CDX94150 | Canola | nucleus | 29.38 | 24.57 |
| CDX76341 | Canola | mitochondrion, plastid | 26.55 | 24.52 |
| CDX98787 | Canola | mitochondrion | 18.56 | 24.32 |
| CDY72577 | Canola | cytosol, mitochondrion | 17.01 | 22.76 |
| CDY14162 | Canola | endoplasmic reticulum | 19.33 | 22.39 |
| CDY04907 | Canola | endoplasmic reticulum | 19.33 | 22.39 |
| CDY41417 | Canola | mitochondrion | 14.95 | 19.4 |
| CDX91120 | Canola | nucleus | 18.56 | 19.2 |
| CDX85648 | Canola | nucleus | 19.33 | 18.99 |
| CDX78523 | Canola | nucleus | 19.59 | 17.04 |
| CDX70505 | Canola | nucleus | 19.59 | 17.04 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.36 | 14.16 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.85 | 13.75 |
| CDY26720 | Canola | cytosol, mitochondrion | 19.33 | 13.3 |
| CDX96693 | Canola | nucleus | 20.1 | 11.59 |
| CDY03037 | Canola | cytosol | 17.01 | 11.42 |
| CDY04137 | Canola | cytosol, plastid | 16.49 | 11.37 |
| CDY17427 | Canola | cytosol, plastid | 16.49 | 11.29 |
| CDY04138 | Canola | cytosol, plastid | 16.24 | 11.23 |
| CDY67405 | Canola | cytosol | 16.75 | 11.23 |
| CDY41676 | Canola | cytosol, plastid | 16.49 | 11.13 |
| CDY45197 | Canola | nucleus, plastid | 16.49 | 10.98 |
| CDY49085 | Canola | cytosol | 15.98 | 10.11 |
| CDY44186 | Canola | nucleus, plastid | 18.56 | 9.85 |
| CDX83739 | Canola | nucleus | 18.56 | 9.74 |
| CDY62588 | Canola | nucleus | 18.04 | 9.45 |
| CDY39317 | Canola | cytosol | 14.69 | 9.39 |
| CDY29389 | Canola | nucleus, plastid | 18.04 | 9.36 |
| CDX75112 | Canola | cytosol | 3.09 | 8.63 |
Protein Annotations
| EnsemblPlants:CDY67178 | EnsemblPlantsGene:GSBRNA2T00059704001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY67178 | ProteinID:CDY67178.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EDE05E | UniProt:A0A078JHU9 | MapMan:35.2 | : | : | : |
Description
BnaCnng53860DBnaCnng53860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHU9]
Coordinates
chrLK035835:+:199..1714
Molecular Weight (calculated)
43242.2 Da
IEP (calculated)
10.703
GRAVY (calculated)
-0.677
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAARWFKG IFGMKKSKEN RVSGDSEYSG NGGGEAGGSL IHRKVLQADS VWLRTYMAET DNEQNKHSIA VAAATAAAAD AAVAAAQAAV AVVRLTSNGR
101: AGGYSGGNGV ERWAAVKIQT IFKGYLARKA LRALKGLVRL QALVRGYLVR KRAAETLHSM QALIRAQTSV RSQRINRNNM LHPRHSLEMF DDSRSEVHSK
201: RISICVERQG SSNNNAYDET SPKIVEIDTY KTKSRSRRMN VAVSECGDDF IYQGKDFEWS FPGDKCKFPT AQNTPRFSSS MANNHHYYTP PSPAKSVSRD
301: VCFRPSYPGL LTPSYMANTQ SFKAKVRSHS APRQRPDRKR LSRDEIMAAR SSVSGVRMVQ PQPQQEKRSS CSYDRQLPQE PADFRFYN
101: AGGYSGGNGV ERWAAVKIQT IFKGYLARKA LRALKGLVRL QALVRGYLVR KRAAETLHSM QALIRAQTSV RSQRINRNNM LHPRHSLEMF DDSRSEVHSK
201: RISICVERQG SSNNNAYDET SPKIVEIDTY KTKSRSRRMN VAVSECGDDF IYQGKDFEWS FPGDKCKFPT AQNTPRFSSS MANNHHYYTP PSPAKSVSRD
301: VCFRPSYPGL LTPSYMANTQ SFKAKVRSHS APRQRPDRKR LSRDEIMAAR SSVSGVRMVQ PQPQQEKRSS CSYDRQLPQE PADFRFYN
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.