Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53133 | Canola | nucleus | 96.52 | 96.91 |
| Bra013672.1-P | Field mustard | mitochondrion, nucleus | 97.34 | 95.77 |
| CDX98787 | Canola | mitochondrion | 50.61 | 83.45 |
| CDY41368 | Canola | mitochondrion, plastid | 69.47 | 80.71 |
| CDX98786 | Canola | nucleus | 78.48 | 80.63 |
| CDX94150 | Canola | nucleus | 75.2 | 79.09 |
| CDX76341 | Canola | mitochondrion, plastid | 67.83 | 78.81 |
| GSMUA_Achr8P11920_001 | Banana | cytosol | 34.84 | 47.35 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 46.31 | 45.75 |
| KRH03972 | Soybean | cytosol | 41.39 | 45.19 |
| CDX90650 | Canola | mitochondrion | 9.43 | 44.66 |
| KRH57246 | Soybean | cytosol | 40.16 | 44.04 |
| CDY29016 | Canola | mitochondrion | 9.22 | 43.69 |
| KRH77498 | Soybean | cytosol, mitochondrion | 35.25 | 43.43 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 40.37 | 42.46 |
| CDX75112 | Canola | cytosol | 12.09 | 42.45 |
| EES12687 | Sorghum | cytosol, mitochondrion | 40.57 | 42.4 |
| Solyc08g007920.1.1 | Tomato | cytosol | 20.29 | 42.31 |
| GSMUA_Achr5P20090_001 | Banana | cytosol, mitochondrion | 39.55 | 42.05 |
| Zm00001d002630_P002 | Maize | mitochondrion | 39.34 | 42.01 |
| Solyc08g080470.2.1 | Tomato | plastid | 42.62 | 41.68 |
| CDX98994 | Canola | mitochondrion | 30.12 | 41.53 |
| CDX70019 | Canola | cytosol, mitochondrion | 30.12 | 41.53 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 42.21 | 41.2 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 38.73 | 41.09 |
| CDX78285 | Canola | plastid | 28.89 | 40.99 |
| Solyc08g007930.1.1 | Tomato | cytosol | 19.06 | 40.97 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 35.86 | 40.79 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 38.52 | 40.69 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 35.66 | 39.73 |
| Zm00001d026084_P001 | Maize | mitochondrion | 39.75 | 39.11 |
| PGSC0003DMT400014796 | Potato | cytosol | 28.69 | 38.89 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 28.48 | 38.19 |
| CDY00253 | Canola | plastid | 30.53 | 37.82 |
| CDX86928 | Canola | mitochondrion, plastid | 30.12 | 37.31 |
| CDX81042 | Canola | plastid | 29.3 | 36.95 |
| CDX73724 | Canola | mitochondrion | 9.84 | 36.92 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 31.76 | 36.64 |
| CDY00251 | Canola | plastid | 30.74 | 36.5 |
| CDY29768 | Canola | cytosol | 12.09 | 35.33 |
| CDY43103 | Canola | cytosol | 26.64 | 35.33 |
| CDX92076 | Canola | cytosol | 27.05 | 34.11 |
| CDX75883 | Canola | cytosol | 26.02 | 33.87 |
| CDY67178 | Canola | cytosol, mitochondrion | 26.43 | 33.25 |
| CDX82400 | Canola | cytosol | 25.41 | 33.24 |
| CDY68636 | Canola | cytosol | 26.23 | 32.9 |
| CDX78003 | Canola | mitochondrion | 10.25 | 32.89 |
| CDY46537 | Canola | cytosol, mitochondrion | 18.85 | 31.72 |
| CDY53440 | Canola | mitochondrion | 18.44 | 31.03 |
| CDY45643 | Canola | cytosol | 20.29 | 30.37 |
| CDY30233 | Canola | mitochondrion | 23.57 | 29.64 |
| CDY47784 | Canola | mitochondrion | 23.36 | 29.38 |
| CDY50677 | Canola | nucleus | 21.93 | 29.08 |
| CDY36861 | Canola | nucleus | 21.72 | 28.34 |
| CDY41423 | Canola | cytosol, mitochondrion | 16.8 | 27.99 |
| CDX70272 | Canola | cytosol, mitochondrion | 16.6 | 27.65 |
| CDY72577 | Canola | cytosol, mitochondrion | 16.19 | 27.24 |
| CDY64325 | Canola | cytosol | 20.49 | 26.81 |
| CDY04907 | Canola | endoplasmic reticulum | 16.8 | 24.48 |
| CDY14162 | Canola | endoplasmic reticulum | 16.8 | 24.48 |
| CDY41417 | Canola | mitochondrion | 13.73 | 22.41 |
| CDX85648 | Canola | nucleus | 15.78 | 19.49 |
| CDX91120 | Canola | nucleus | 14.75 | 19.2 |
| CDX70505 | Canola | nucleus | 15.98 | 17.49 |
| CDX78523 | Canola | nucleus | 15.78 | 17.26 |
| CDX83805 | Canola | cytosol, mitochondrion | 16.8 | 14.7 |
| CDY19251 | Canola | cytosol, mitochondrion | 16.6 | 14.46 |
| CDY26720 | Canola | cytosol, mitochondrion | 16.6 | 14.36 |
| CDY41676 | Canola | cytosol, plastid | 15.57 | 13.22 |
| CDY67405 | Canola | cytosol | 15.37 | 12.95 |
| CDX96693 | Canola | nucleus | 16.8 | 12.18 |
| CDY04138 | Canola | cytosol, plastid | 13.93 | 12.12 |
| CDY04137 | Canola | cytosol, plastid | 13.93 | 12.08 |
| CDY45197 | Canola | nucleus, plastid | 14.14 | 11.84 |
| CDY17427 | Canola | cytosol, plastid | 13.73 | 11.82 |
| CDY03037 | Canola | cytosol | 13.73 | 11.59 |
| CDY49085 | Canola | cytosol | 14.55 | 11.58 |
| CDY39317 | Canola | cytosol | 13.73 | 11.04 |
| CDX83739 | Canola | nucleus | 15.37 | 10.15 |
| CDY62588 | Canola | nucleus | 14.75 | 9.72 |
| CDY44186 | Canola | nucleus, plastid | 14.55 | 9.71 |
| CDY29389 | Canola | nucleus, plastid | 14.34 | 9.36 |
Protein Annotations
| EnsemblPlants:CDY41252 | EnsemblPlantsGene:GSBRNA2T00072675001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF13 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY41252 | ProteinID:CDY41252.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EF2171 | UniProt:A0A078HTR1 | MapMan:35.2 | : | : | : |
Description
BnaA01g12870DBnaA01g12870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTR1]
Coordinates
chrLK032494:-:61063..64286
Molecular Weight (calculated)
53627.9 Da
IEP (calculated)
10.678
GRAVY (calculated)
-0.740
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKASRWFRN LFGLKKTEPG YPDPSLETPS RSYTKRRWSF VKSKREKETA PPNQHPPPPS SLPNSTPPPS SYYPKSSPSP RKQKPVWEDE GDDDSAKHAI
101: AVAAATAAVA KAAVNAANAA AAVVRLTSKS GRIMRSPVTA HFSNGFEDVP AYVSKFDGHG SGRGVCEDLA AIKIQSAFRG YLARRALRAL KGLVRLQAIV
201: RGHIERKRMS VHLRRMHALV RAQARVRASR VVVTSESSSS QSNNTKSSHF QNPGPPTPEK LEHSISSRSS KLGHSHLFKR NGSKANNNSN KPYTSAHREV
301: FSAMNEEEKI LEIDRKHNSS YTRRSRPDMF YSSHLVLDNS GRSGPVYPMP FSPSSSHEET VNQFFTAENS PQLYSATSVS KRSAFTASSI APSDCTKSCC
401: YADHPSYMAC TESSRAKARS ASAPKSRPQL FYDQSSSKRF GFVDVPYCGG DTKSGPQKGS ALHASFMNKA YPGSGRLDRL GMPISYRY
101: AVAAATAAVA KAAVNAANAA AAVVRLTSKS GRIMRSPVTA HFSNGFEDVP AYVSKFDGHG SGRGVCEDLA AIKIQSAFRG YLARRALRAL KGLVRLQAIV
201: RGHIERKRMS VHLRRMHALV RAQARVRASR VVVTSESSSS QSNNTKSSHF QNPGPPTPEK LEHSISSRSS KLGHSHLFKR NGSKANNNSN KPYTSAHREV
301: FSAMNEEEKI LEIDRKHNSS YTRRSRPDMF YSSHLVLDNS GRSGPVYPMP FSPSSSHEET VNQFFTAENS PQLYSATSVS KRSAFTASSI APSDCTKSCC
401: YADHPSYMAC TESSRAKARS ASAPKSRPQL FYDQSSSKRF GFVDVPYCGG DTKSGPQKGS ALHASFMNKA YPGSGRLDRL GMPISYRY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.