Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023414.1-P | Field mustard | nucleus | 99.49 | 99.49 |
| CDX91120 | Canola | nucleus | 79.75 | 84.0 |
| CDX70505 | Canola | nucleus | 84.81 | 75.11 |
| CDX78523 | Canola | nucleus | 84.81 | 75.11 |
| AT5G13460.1 | Thale cress | nucleus | 81.52 | 72.69 |
| KRH23930 | Soybean | nucleus | 46.84 | 40.22 |
| KRH39865 | Soybean | nucleus | 47.34 | 39.87 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 46.84 | 39.45 |
| KRH29958 | Soybean | cytosol, mitochondrion | 44.81 | 38.73 |
| KRH63082 | Soybean | cytosol | 43.8 | 38.44 |
| CDX90650 | Canola | mitochondrion | 9.87 | 37.86 |
| CDY29016 | Canola | mitochondrion | 9.62 | 36.89 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 42.03 | 36.24 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 39.24 | 36.05 |
| CDY72577 | Canola | cytosol, mitochondrion | 21.52 | 29.31 |
| CDX73724 | Canola | mitochondrion | 9.37 | 28.46 |
| CDX70272 | Canola | cytosol, mitochondrion | 20.76 | 27.99 |
| CDY29768 | Canola | cytosol | 11.65 | 27.54 |
| CDY14162 | Canola | endoplasmic reticulum | 23.29 | 27.46 |
| CDY04907 | Canola | endoplasmic reticulum | 23.29 | 27.46 |
| CDY41423 | Canola | cytosol, mitochondrion | 20.25 | 27.3 |
| CDY53440 | Canola | mitochondrion | 19.49 | 26.55 |
| CDX78003 | Canola | mitochondrion | 10.13 | 26.32 |
| CDY46537 | Canola | cytosol, mitochondrion | 19.24 | 26.21 |
| CDY41417 | Canola | mitochondrion | 18.48 | 24.41 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 26.08 | 22.94 |
| CDY45643 | Canola | cytosol | 18.48 | 22.39 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 26.58 | 22.06 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 26.33 | 21.67 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 25.82 | 21.43 |
| CDX78285 | Canola | plastid | 18.48 | 21.22 |
| CDX70019 | Canola | cytosol, mitochondrion | 18.73 | 20.9 |
| CDX98994 | Canola | mitochondrion | 18.73 | 20.9 |
| CDX75883 | Canola | cytosol | 19.75 | 20.8 |
| Os03t0355700-00 | Rice | cytosol | 23.29 | 20.4 |
| CDY00253 | Canola | plastid | 20.25 | 20.3 |
| CDY50677 | Canola | nucleus | 18.73 | 20.11 |
| CDX82400 | Canola | cytosol | 18.99 | 20.11 |
| CDY36861 | Canola | nucleus | 18.99 | 20.05 |
| CDX86928 | Canola | mitochondrion, plastid | 20.0 | 20.05 |
| EER94844 | Sorghum | cytosol | 25.32 | 20.04 |
| Zm00001d029197_P001 | Maize | nucleus | 24.05 | 19.96 |
| CDY43103 | Canola | cytosol | 18.48 | 19.84 |
| CDX92076 | Canola | cytosol | 19.24 | 19.64 |
| CDY68636 | Canola | cytosol | 19.24 | 19.54 |
| CDY00251 | Canola | plastid | 20.25 | 19.46 |
| CDY67178 | Canola | cytosol, mitochondrion | 18.99 | 19.33 |
| CDX81042 | Canola | plastid | 18.73 | 19.12 |
| CDY64325 | Canola | cytosol | 17.97 | 19.03 |
| CDY47784 | Canola | mitochondrion | 17.72 | 18.04 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 25.06 | 17.81 |
| CDY30233 | Canola | mitochondrion | 17.47 | 17.78 |
| CDY41368 | Canola | mitochondrion, plastid | 18.48 | 17.38 |
| CDX76341 | Canola | mitochondrion, plastid | 17.97 | 16.9 |
| CDX98787 | Canola | mitochondrion | 12.15 | 16.22 |
| CDY53133 | Canola | nucleus | 19.75 | 16.05 |
| CDY41252 | Canola | cytosol, mitochondrion | 19.49 | 15.78 |
| CDX94150 | Canola | nucleus | 18.48 | 15.73 |
| CDX98786 | Canola | nucleus | 18.73 | 15.58 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.51 | 14.52 |
| CDY19251 | Canola | cytosol, mitochondrion | 20.51 | 14.46 |
| CDY26720 | Canola | cytosol, mitochondrion | 20.0 | 14.01 |
| CDY67405 | Canola | cytosol | 20.25 | 13.82 |
| CDY41676 | Canola | cytosol, plastid | 18.99 | 13.04 |
| CDY45197 | Canola | nucleus, plastid | 18.48 | 12.52 |
| CDY03037 | Canola | cytosol | 18.23 | 12.46 |
| CDX96693 | Canola | nucleus | 20.76 | 12.18 |
| CDY04138 | Canola | cytosol, plastid | 17.22 | 12.12 |
| CDY04137 | Canola | cytosol, plastid | 17.22 | 12.08 |
| CDY17427 | Canola | cytosol, plastid | 17.22 | 11.99 |
| CDY44186 | Canola | nucleus, plastid | 19.49 | 10.53 |
| CDX83739 | Canola | nucleus | 19.49 | 10.42 |
| CDY29389 | Canola | nucleus, plastid | 19.49 | 10.29 |
| CDY62588 | Canola | nucleus | 19.24 | 10.26 |
| CDY39317 | Canola | cytosol | 14.43 | 9.39 |
| CDY49085 | Canola | cytosol | 14.43 | 9.3 |
| CDX75112 | Canola | cytosol | 1.77 | 5.04 |
Protein Annotations
| EnsemblPlants:CDX85648 | EnsemblPlantsGene:GSBRNA2T00143380001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF35 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDX85648 | ProteinID:CDX85648.1 | SMART:SM00015 |
| SUPFAM:SSF52540 | UniParc:UPI0004EF3776 | MapMan:35.1 | : | : | : |
Description
BnaA02g01650D
Coordinates
chrLK031842:-:1009879..1011862
Molecular Weight (calculated)
45625.2 Da
IEP (calculated)
10.553
GRAVY (calculated)
-0.921
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKKGLFTI LKRIFISESH SDKKEKRRRW IFWKVKVNKR LPSITAPPEN GTRHEEHKEE SVADVDEASY VSCSPQLDSI EKLETADLVA QYQMFLNKEE
101: EVLAATRIQT AFRGYLARKA LRALKGIVKL QAYIRGRAVR RQAMTTLKCL QSVVNIQSQV CASRTQLPRG SHRDYEESNT SHMFSENTLK VDTNGQKRWD
201: DSLLTKEEAK AVVMSKREAS LRRERTKEYA VTHRKSAESY QKRDRNTKWK YWLDEWVDTQ RTKSKELEDL DLSLKPKPKD ETMNKTPRNS SPRRLASFNN
301: NHRRQVSISE EEEQNPGGAV TVVTPTYMVA TESAKAKSRS LMSSPRIRSR SFDTQLESYS PYKNKMFLTS SVMSEAPNKV RASAYQQRSP GLRGF
101: EVLAATRIQT AFRGYLARKA LRALKGIVKL QAYIRGRAVR RQAMTTLKCL QSVVNIQSQV CASRTQLPRG SHRDYEESNT SHMFSENTLK VDTNGQKRWD
201: DSLLTKEEAK AVVMSKREAS LRRERTKEYA VTHRKSAESY QKRDRNTKWK YWLDEWVDTQ RTKSKELEDL DLSLKPKPKD ETMNKTPRNS SPRRLASFNN
301: NHRRQVSISE EEEQNPGGAV TVVTPTYMVA TESAKAKSRS LMSSPRIRSR SFDTQLESYS PYKNKMFLTS SVMSEAPNKV RASAYQQRSP GLRGF
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.